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Computational design of pH-sensitive binders

Green Ahn, Brian Coventry, Ella Haefner, et al.

Selected by 03 November 2025

Mohammed JALLOH

Bioinformatics

Deep learning-based predictions of gene perturbation effects do not yet outperform simple linear methods

Constantin Ahlmann-Eltze, Wolfgang Huber, Simon Anders

Selected by 11 November 2024

Benjamin Dominik Maier

Bioinformatics

Enhancer-driven cell type comparison reveals similarities between the mammalian and bird pallium

Nikolai Hecker , Niklas Kempynck , David Mauduit, et al.

Selected by 02 July 2024

Rodrigo Senovilla-Ganzo

Bioinformatics

Holimap: an accurate and efficient method for solving stochastic gene network dynamics

Chen Jia, Ramon Grima

Selected by 25 March 2024

Benjamin Dominik Maier

Systems Biology

Single-cell epigenomic reconstruction of developmental trajectories in human neural organoid systems from pluripotency

Fides Zenk, Jonas Simon Fleck, Sophie Martina Johanna Jansen, et al.

Selected by 04 January 2024

Manuel Lessi

Neuroscience

Inferring protein from mRNA concentrations using convolutional neural networks

Patrick Maximilian Schwehn, Pascal Falter-Braun

Selected by 20 December 2023

Benjamin Dominik Maier

Bioinformatics

Inference of drug off-target effects on cellular signaling using Interactome-Based Deep Learning

Nikolaos Meimetis, Douglas A. Lauffenburger, Avlant Nilsson

Selected by 29 November 2023

Benjamin Dominik Maier

Bioinformatics

Biologically informed NeuralODEs for genome-wide regulatory dynamics

Intekhab Hossain, Viola Fanfani, John Quackenbush, et al.

Selected by 31 May 2023

Benjamin Dominik Maier

Bioinformatics

Embryo mechanics cartography: inference of 3D force atlases from fluorescence microscopy

Sacha Ichbiah, Fabrice Delbary, Alex McDougall, et al.

Selected by 04 May 2023

Girish Kale

Developmental Biology

Phospho-seq: Integrated, multi-modal profiling of intracellular protein dynamics in single cells

John D. Blair, Austin Hartman, Fides Zenk, et al.

Selected by 19 April 2023

Benjamin Dominik Maier

Molecular Biology

Massively parallel protein-protein interaction measurement by sequencing (MP3-seq) enables rapid screening of protein heterodimers

Alexander Baryshev, Alyssa La Fleur, Benjamin Groves, et al.

Selected by 07 April 2023

Benjamin Dominik Maier

Genomics

Enrichment of gut microbiome strains for cultivation-free genome sequencing using droplet microfluidics

Anna Pryszlak, Tobias Wenzel, Kiley West Seitz, et al.

Selected by 24 June 2021

Afonso Mendes

Genomics