Bioinformatics Archives - preLights

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Preprint highlights, selected by the biological community

Filtered by bioinformatics category

Single-cell gene regulatory network analysis reveals new melanoma cell states and transition trajectories during phenotype switching

Jasper Wouters, Zeynep Kalender-Atak, Liesbeth Minnoye, et al.

Hannah Brunsdon

CLIJ: GPU-accelerated image processing for everyone

Robert Haase, Loic A. Royer, Peter Steinbach, et al.

1

A novel metric reveals previously unrecognized distortion in dimensionality reduction of scRNA-Seq data

Shamus M. Cooley, Timothy Hamilton, Eric J. Deeds, et al.

1

Cholesterol and matrisome pathways dysregulated in human APOE ε4 glia

Julia TCW, Shuang A. Liang, Lu Qian, et al.

Theresa Pohlkamp

2

Gene regulatory network inference and analysis of multidrug-resistant Pseudomonas aeruginosa

Fernando Medeiros Filho, Ana Paula Barbosa do Nascimento, Marcelo Trindade dos Santos, et al.

Integrated Metabolomic and Transcriptomic Profiling Reveals Novel Activation-Induced Metabolic Networks in Human T cells

S. Hiemer, S. Jatav, J. Jussif, et al.

Species-specific oscillation periods of human and mouse segmentation clocks are due to cell autonomous differences in biochemical reaction parameters

Mitsuhiro Matsuda, Hanako Hayashi, Jordi Garcia-Ojalvo, et al.

Irepan Salvador-Martinez

1

Benchmarking Single-Cell RNA Sequencing Protocols for Cell Atlas Projects

Elisabetta Mereu, Atefeh Lafzi, Catia Moutinho, et al.

AND

Systematic comparative analysis of single cell RNA-sequencing methods

Jiarui Ding, Xian Adiconis, Sean K. Simmons, et al.

1

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