Close

A transition from SoxB1 to SoxE transcription factors is essential for progression from pluripotent blastula cells to neural crest cells

Elsy Buitrago-Delgado, Elizabeth Schock, Kara Nordin, Carole LaBonne

Preprint posted on 13 July 2018 https://www.biorxiv.org/content/early/2018/07/13/359752

Article now published in Developmental Biology at http://dx.doi.org/10.1016/j.ydbio.2018.08.008

The neural crest, the last frontier of stemness and pluripotency of the developing vertebrate embryo, is maintained purposefully and distinctly by SoxE transcription factors.

Selected by Amanda Haage

Categories: developmental biology

Why This Is Cool – This story is fundamental developmental biology at it’s finest. The authors set out to answer a seemingly facile question – as development progresses, why does the vertebrate embryo switch between different transcriptions factors that seem to do the same thing? SoxB1 transcription factors (Sox1-3) maintain the stem cell state in the early blastula and in embryonic stem cells. As the embryo transitions to being more defined and differentiated, the neural crest cells represent one of the last cell populations holding onto a stem cell-like state and pluripotency. Though neural crest cells and blastula cells have many similarities, they express different Sox transcription factors, with the neural crest transitioning to expressing SoxE factors (Sox8-10). The authors demonstrate this through a beautiful sequence of in situs of Xenopus embryos where you can see the gradual restriction of Sox2&3expression to the neural plate, while Sox9&10 becomes upregulated specifically in the neural crest (Figure1).

Figure 1. Expression of SoxB1 and SoxE factors in Xenopus embryos. (A) In situ hybridization examining Sox2 and Sox3 expression in wildtype Xenopus embryos collected between blastula and late neurula stages. (B) In situ hybridization examining Sox8, Sox9, and Sox10 expression in wildtype Xenopus embryos collected between blastula and late neurula stages.

 

The authors then complete a series of in vivo rescue experiments and functional differentiation experiments to test what redundancy or specificity exists between the SoxB1 and SoxE factors. First, early expression of SoxE in the blastula inhibits expression of pluripotent cell markers. Second, forced expression of SoxB1 in the neural crest downregulates specific neural crest markers. These results are consistent with their spatial expression patterns, but how do they affect the actual function of pluripotency, i.e. the ability of cells to differentiate into multiple lineages? Here, they used explant cultures of blastula cells and measured the induction of mesoderm markers over time. Overexpression of both SoxB1 and SoxE factors inhibited mesoderm differentiation, but this appears to be a concentration-dependent response, as both SoxB1 and SoxE factors could also rescue mesoderm differentiation in SoxB1 depleted explants. This means that both SoxB1 and SoxE can maintain pluripotency, but their expression is still spatially separated, why? The authors hypothesize that the different transcription factors prepare the cells to adopt different lineages, namely SoxB1 for neural induction and SoxE for neural crest, following their spatial expression patterns. Further utilizing their explant system to test functional differentiation, they are able to confirm this hypothesis. Only SoxB1 factors can rescue neural marker expression and only SoxE factors can rescue neural crest marker expression.

Why I Selected It – I started my career studying how cells move in the context of cancer cell metastasis. This field is huge and obviously very important to human health, but I think it collectively forgets that cells don’t only move when they aren’t supposed to. Developmental biology was studying how cells move in vivo long before it became a major target of various cancer therapies. We still have a lot to learn about when, why, and how cells move in vivo and this is why the neural crest is one of my new scientific loves. The neural crest derivates migrate huge distances in development, ending up at specific places at the end, not unlike cancer cells undergoing metastasis. If we can better understand how cells move in the massively complex context of animal development, maybe we can better understand how cells move in cancer. This is why I’m trying to learn as much as I can about the neural crest.

Open Questions –

  1. Post-translational modification alters the function of SoxE factors. Is there a similar mechanism for SoxB1 factors? If not, could this specialty also contribute to why SoxE factors are necessary? Would you get different results if you block the post-translational modification of SoxE factors in your experiments?
  2. Is the somewhat overlapping function of SoxB1 and SoxE factors also represented in their sequence or structure similarities? Since the Sox family was created through many duplication events are these two sub-classes particularly closely related?
  3. For the in vivo rescue experiments, how severe are the defects? Can you still get a functional adult organism with early expression of SoxE or forced expression of SoxB1 in the neural crest?

Related References –

  1. Sox family of transcription factors in controlling pluripotency
    1. Takahashi K. & Yamanaka S. Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors. Cell (2006). 25;126(4):663-76.
  2. Neural crest cells and blastula cells have similar gene expression profiles
    1. Buitrago-Delgado E., Nordin K., Rao A., Geary L., & LaBonne C. Shared pluripotency programs suggest derivation of vertebrate neural crest from blastula cells. Science (2015). 19; 348(6241): 1332–1335.
  3. Explant culture system used
    1. Ariizumi T. & Asashima M. In vitro induction systems for analyses of amphibian organogenesis and body patterning. Int J. Dev Biol (2001). 45(1):273-9.

Tags: neural crest, pluripotency, stem cell, xenopus

Posted on: 2 August 2018

doi: https://doi.org/10.1242/prelights.4048

Read preprint (No Ratings Yet)

Have your say

Your email address will not be published. Required fields are marked *

This site uses Akismet to reduce spam. Learn how your comment data is processed.

Sign up to customise the site to your preferences and to receive alerts

Register here

preLists in the developmental biology category:

GfE/ DSDB meeting 2024

This preList highlights the preprints discussed at the 2024 joint German and Dutch developmental biology societies meeting that took place in March 2024 in Osnabrück, Germany.

 



List by Joyce Yu

‘In preprints’ from Development 2022-2023

A list of the preprints featured in Development's 'In preprints' articles between 2022-2023

 



List by Alex Eve, Katherine Brown

preLights peer support – preprints of interest

This is a preprint repository to organise the preprints and preLights covered through the 'preLights peer support' initiative.

 



List by preLights peer support

The Society for Developmental Biology 82nd Annual Meeting

This preList is made up of the preprints discussed during the Society for Developmental Biology 82nd Annual Meeting that took place in Chicago in July 2023.

 



List by Joyce Yu, Katherine Brown

CSHL 87th Symposium: Stem Cells

Preprints mentioned by speakers at the #CSHLsymp23

 



List by Alex Eve

Journal of Cell Science meeting ‘Imaging Cell Dynamics’

This preList highlights the preprints discussed at the JCS meeting 'Imaging Cell Dynamics'. The meeting was held from 14 - 17 May 2023 in Lisbon, Portugal and was organised by Erika Holzbaur, Jennifer Lippincott-Schwartz, Rob Parton and Michael Way.

 



List by Helen Zenner

9th International Symposium on the Biology of Vertebrate Sex Determination

This preList contains preprints discussed during the 9th International Symposium on the Biology of Vertebrate Sex Determination. This conference was held in Kona, Hawaii from April 17th to 21st 2023.

 



List by Martin Estermann

Alumni picks – preLights 5th Birthday

This preList contains preprints that were picked and highlighted by preLights Alumni - an initiative that was set up to mark preLights 5th birthday. More entries will follow throughout February and March 2023.

 



List by Sergio Menchero et al.

CellBio 2022 – An ASCB/EMBO Meeting

This preLists features preprints that were discussed and presented during the CellBio 2022 meeting in Washington, DC in December 2022.

 



List by Nadja Hümpfer et al.

2nd Conference of the Visegrád Group Society for Developmental Biology

Preprints from the 2nd Conference of the Visegrád Group Society for Developmental Biology (2-5 September, 2021, Szeged, Hungary)

 



List by Nándor Lipták

Fibroblasts

The advances in fibroblast biology preList explores the recent discoveries and preprints of the fibroblast world. Get ready to immerse yourself with this list created for fibroblasts aficionados and lovers, and beyond. Here, my goal is to include preprints of fibroblast biology, heterogeneity, fate, extracellular matrix, behavior, topography, single-cell atlases, spatial transcriptomics, and their matrix!

 



List by Osvaldo Contreras

EMBL Synthetic Morphogenesis: From Gene Circuits to Tissue Architecture (2021)

A list of preprints mentioned at the #EESmorphoG virtual meeting in 2021.

 



List by Alex Eve

EMBL Conference: From functional genomics to systems biology

Preprints presented at the virtual EMBL conference "from functional genomics and systems biology", 16-19 November 2020

 



List by Jesus Victorino

Single Cell Biology 2020

A list of preprints mentioned at the Wellcome Genome Campus Single Cell Biology 2020 meeting.

 



List by Alex Eve

Society for Developmental Biology 79th Annual Meeting

Preprints at SDB 2020

 



List by Irepan Salvador-Martinez, Martin Estermann

FENS 2020

A collection of preprints presented during the virtual meeting of the Federation of European Neuroscience Societies (FENS) in 2020

 



List by Ana Dorrego-Rivas

Planar Cell Polarity – PCP

This preList contains preprints about the latest findings on Planar Cell Polarity (PCP) in various model organisms at the molecular, cellular and tissue levels.

 



List by Ana Dorrego-Rivas

Cell Polarity

Recent research from the field of cell polarity is summarized in this list of preprints. It comprises of studies focusing on various forms of cell polarity ranging from epithelial polarity, planar cell polarity to front-to-rear polarity.

 



List by Yamini Ravichandran

TAGC 2020

Preprints recently presented at the virtual Allied Genetics Conference, April 22-26, 2020. #TAGC20

 



List by Maiko Kitaoka et al.

3D Gastruloids

A curated list of preprints related to Gastruloids (in vitro models of early development obtained by 3D aggregation of embryonic cells). Updated until July 2021.

 



List by Paul Gerald L. Sanchez and Stefano Vianello

ASCB EMBO Annual Meeting 2019

A collection of preprints presented at the 2019 ASCB EMBO Meeting in Washington, DC (December 7-11)

 



List by Madhuja Samaddar et al.

EDBC Alicante 2019

Preprints presented at the European Developmental Biology Congress (EDBC) in Alicante, October 23-26 2019.

 



List by Sergio Menchero et al.

EMBL Seeing is Believing – Imaging the Molecular Processes of Life

Preprints discussed at the 2019 edition of Seeing is Believing, at EMBL Heidelberg from the 9th-12th October 2019

 



List by Dey Lab

SDB 78th Annual Meeting 2019

A curation of the preprints presented at the SDB meeting in Boston, July 26-30 2019. The preList will be updated throughout the duration of the meeting.

 



List by Alex Eve

Lung Disease and Regeneration

This preprint list compiles highlights from the field of lung biology.

 



List by Rob Hynds

Young Embryologist Network Conference 2019

Preprints presented at the Young Embryologist Network 2019 conference, 13 May, The Francis Crick Institute, London

 



List by Alex Eve

Pattern formation during development

The aim of this preList is to integrate results about the mechanisms that govern patterning during development, from genes implicated in the processes to theoritical models of pattern formation in nature.

 



List by Alexa Sadier

BSCB/BSDB Annual Meeting 2019

Preprints presented at the BSCB/BSDB Annual Meeting 2019

 



List by Dey Lab

Zebrafish immunology

A compilation of cutting-edge research that uses the zebrafish as a model system to elucidate novel immunological mechanisms in health and disease.

 



List by Shikha Nayar
Close