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Similarity metric learning on perturbational datasets improves functional identification of perturbations

Ian Smith, Petr Smirnov, Benjamin Haibe-Kains

Selected by 17 August 2023

Benjamin Dominik Maier, Anna Foix Romero

Bioinformatics

Biologically informed NeuralODEs for genome-wide regulatory dynamics

Intekhab Hossain, Viola Fanfani, John Quackenbush, et al.

Selected by 31 May 2023

Benjamin Dominik Maier

Bioinformatics

Massively parallel protein-protein interaction measurement by sequencing (MP3-seq) enables rapid screening of protein heterodimers

Alexander Baryshev, Alyssa La Fleur, Benjamin Groves, et al.

Selected by 07 April 2023

Benjamin Dominik Maier

Genomics

Multiscale light-sheet organoid imaging framework

Gustavo de Medeiros, Raphael Ortiz, Petr Strnad, et al.

Selected by 29 August 2021

Osvaldo Contreras

Bioengineering

Discovery and visualization of uncharacterized drug-protein adducts using mass spectrometry

Michael Riffle, Michael R. Hoopmann, Daniel Jaschob, et al.

Selected by 10 July 2021

Zhang-He Goh

Pharmacology and Toxicology

Classification of non-coding variants with high pathogenic impact

Lambert Moyon, Camille Berthelot, Alexandra Louis, et al.

Selected by 22 June 2021

Jeffrey Calhoun

Bioinformatics

Systematic reconstruction of the cellular trajectories of mammalian embryogenesis

Chengxiang Qiu, Junyue Cao, Tony Li, et al.

Selected by 18 June 2021

Bobby Ranjan

Bioinformatics

A spatially aware likelihood test to detect sweeps from haplotype distributions

Michael DeGiorgio, Zachary A. Szpiech

Selected by 01 June 2021

Matteo Fumagalli

Precise genomic deletions using paired prime editing

Junhong Choi, Wei Chen, Chase C. Suiter, et al.

Selected by 27 January 2021

Fabio Liberante

Genomics

Interactive design of GPU-accelerated Image Data Flow Graphs and cross-platform deployment using multi-lingual code generation

Robert Haase, Akanksha Jain, Stéphane Rigaud, et al.

Selected by 20 December 2020

Mariana De Niz

Deep Learning Enables Individual Xenograft Cell Classification in Histological Images by Analysis of Contextual Features

Quentin Juppet, Fabio De Martino, Martin Weigert, et al.

Selected by 15 December 2020

Mariana De Niz

Cell Biology

FLIMJ: an open-source ImageJ toolkit for fluorescence lifetime image data analysis

Dasong Gao, Paul R Barber, Jenu V Chacko, et al.

Selected by 25 November 2020

Mariana De Niz

Bioinformatics
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