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Lineage-specific CDK activity dynamics characterize early mammalian development

Bechara Saykali, Andy D. Tran, James A. Cornwell, Matthew A. Caldwell, Paniz Rezvan Sangsari, Nicole Y. Morgan, Michael J. Kruhlak, Steven D. Cappell, Sergio Ruiz

Posted on: 2 August 2024

Preprint posted on 14 June 2024

Catch them in the act : the swing of CDKs

Selected by Mansi

Categories: developmental biology

Background:  In mammals, the pre-implantation embryo takes all the big decisions on its own. Cell-cycle is the force driving it towards becoming a completely autonomous entity, with two distinct cell-types – the trophoectoderm (TE) and the inner cell mass (ICM). The cell-cycle is different between the embryo and the somatic cells, even though cyclins and cyclin-dependent kinases (CDKs) are involved in both. In this preprint, the authors turned into cinematographers, capturing the real time dynamics of CDKs using a very sensitive sensor.

Key findings of the study:

Generating the mouse model – Generating genetically modified mouse lines is a difficult task. A good reporter for studying cell-cycle dynamics in the pre-implantation embryo should capture  – low levels of protein, the dynamics of protein at single-cell level and rapid changes in the subcellular localisation of the protein.

The authors achieved all of these by stitching five DNA elements together –

  1. A portion of DNA human helicase B (DHB) containing four CDK phosphorylation sites
  2. Fluorescent protein mClover3
  3. Self-cleaving T2A peptide sequence
  4. Histone 2B (H2B) tag
  5. Fluorescent protein mRuby3

The CDK activity increases from G0/G1-S-G2/M phase and the mClover reporter translocate between the nucleus (low activity) and the cytoplasm (high activity) in a CDK-dependent manner, providing a quantifiable readout of CDK activity at a single-cell level.

Developmental stage specific CDK activity – The signal from the CDK sensor was apparent in the cytoplasm during the morula and mid-blastocyst stages suggesting high CDK activity. The late blastocyst has three major cell types – outer trophoblast layer (CDX2+), the epiblast (NANOG+), and the primitive endoderm layer (GATA6+). The authors made several fascinating observations giving us a peek into molecular events that are otherwise hard to probe. CDK activity decreased in the outer trophoblast as the embryo made preparations for  implanting itself in the uterus, however CDK activity remained high in the epiblast and primitive endoderm cells.

The molecule that causes the dip in CDK activity in the trophoblast – Interestingly, the three cell-types present in the blastocyst can be maintained in-vitro as self-renewing stem cells. To achieve this, trophoblast stem cells (TSCs) rely on fibroblast growth factor 4 (FGF4) whereas embryonic stem cells (ESCs) require leukaemia inhibitory factor (LIF) to self-renew. The authors performed FGF4 or LIF withdrawal experiments on TSCs and ESCs respectively and found that TSC were intrinsically more prone than ESC to downregulate CDK activity upon changes in the levels of self-renewing signals. This simple experiment offers a fundamental finding which the field lacked for a long-time.

Conservation of lineage-specific regulation of CDK activity in human TE-like cells –  The authors, leveraging their experimental strengths, used a 2D system to mimic human gastrulation to study CDK dynamics in human TE-like cells. The human ESCs were cultured in the circular micropatterned chip and stimulated with BMP4 to induce differentiation. The outermost ring of TE-like cells (CDX2+) showed nuclear enrichment of the CDK reporter, consistent with the observations in mouse embryo.

What I like about the preprint:

This preprint describes a beautiful tool that can be used to understand cell-cycle dynamics in early embryogenesis. Recently, there has been an explosion of papers that describe self-organising properties of stem cells into embryo-like structures. But how exactly do cells self-organise? The tool  described here can potentially be used to address some of the fundamental processes underlying self-organisation, and the autonomous developmental potential that stem cells carry. It is an elegantly designed system which can be used very easily and efficiently. The authors have used it to reveal the differences in cell cycle dynamics between ESCs and TSCs, which in itself is intriguing.

 

doi: https://doi.org/10.1242/prelights.38013

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Author's response

Sergio Ruiz shared

Questions for the Authors:

 

  1. There is a huge metabolic shift that accompanies morula to blastocyst transition. Does the CDK activity depend on the metabolic state of the cell? For example, what would happen to CDK activity if the embryo is transiently deprived of amino-acids or glycolysis is moderately inhibited ?

Adaptative changes during embryonic development in metabolism are intimately coordinated with regulators of the cell cycle. Indeed, CDKs can directly or indirectly influence the regulation of metabolic pathways and vice versa. In our experimental setting, detecting changes in CDK activity in cells of the TE, could reflect changes in their metabolism. By the same token, changes in the levels of external nutrients affect the metabolic and proliferative state of the blastocyst. When embryos experience nutrient deprivation or certain experimental conditions such as the use of mTOR inhibitors, they can enter a state of diapause, where development temporarily halts. In this state, cells from the inner cell mass (ICM) and the TE, enter a transient G0/G1 state which is predicted to show nuclear localization of the CDK reporter. We are looking forward to test our model in an system of induced diapause. This will help us to examine the regulation of CDK activity during embryonic arrest, and the subsequent resumption in development following the removal of the diapause trigger.

 

  1. What would happen to the CDK activity in polar and mural TE cells if the FGF gradients along the embryonic-abembryonic axis is disrupted ?

We wondered that ourselves too! We set out to answer this question by supplying exogenous FGF4 to blastocysts prior to the moment we observed the CDK activity decrease in the TE. As predicted, we showed that exogenous FGF4 was able to rescue the drop on CDK activity in the mural TE. We are currently exploring the effects of adding to the blastocyst specific inhibitors targeting FGF receptors to examine CDK activity dynamics. But that’s not all! We are also testing the relevance of the FGF pathway in regulating the translocation of the CDK reporter in the 2D system mimicking human gastrulation.

 

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