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FENS 2020

A collection of preprints presented during the virtual meeting of the Federation of European Neuroscience Societies (FENS) in 2020

List by Ana Dorrego-Rivas

Preprints:

A calibrated optogenetic toolbox of stable zebrafish opsin lines

P Antinucci, AS Dumitrescu, C Deleuze, HJ Morley, K Leung, T Hagley, F Kubo, H Baier, IH Bianco, C Wyart

https://www.biorxiv.org/content/10.1101/2020.01.13.904185v1

Deep learning based behavioral analysis enables high precision rodent tracking and is capable of outperforming commercial solutions

Oliver Sturman, Lukas von Ziegler, Christa Schläppi, Furkan Akyol, Benjamin Grewe, Johannes Bohacek

https://www.biorxiv.org/content/10.1101/2020.01.21.913624v1

Automatic deep learning driven label-free image guided patch clamp system for human and rodent in vitro slice physiology

Krisztian Koos, Gáspár Oláh, Tamas Balassa, Norbert Mihut, Márton Rózsa, Attila Ozsvár, Ervin Tasnadi, Pál Barzó, Nóra Faragó, László Puskás, Gábor Molnár, József Molnár, Gábor Tamás, Peter Horvath

https://www.biorxiv.org/content/10.1101/2020.05.05.078162v1

A genetically encoded red fluorescence dopamine biosensor enables dual imaging of dopamine and norepinephrine

Chihiro Nakamoto, Yuhei Goto, Yoko Tomizawa, Yuko Fukata, Masaki Fukata, Kasper Harpsøe, David E. Gloriam, Kazuhiro Aoki, Tomonori Takeuchi

https://www.biorxiv.org/content/10.1101/2020.05.25.115162v1

https://www.biorxiv.org/content/10.1101/2020.06.30.180786v1

Altered synaptic ingestion by human microglia in Alzheimer’s disease

Makis Tzioras, Michael J.D. Daniels, Declan King, Karla Popovic, Rebecca K. Holloway, Anna J. Stevenson, Jane Tulloch, Jothy Kandasamy, Drahoslav Sokol, Clare Latta, Jamie Rose, Colin Smith, Veronique E. Miron, Christopher Henstridge, Barry W. McColl, Tara L. Spires-Jones

https://www.biorxiv.org/content/10.1101/795930v1

Astrocytes Contribute to Remote Memory Formation by Modulating Hippocampal-Cortical Communication During Learning

Adi Kol, Adar Adamsky, Maya Groysman, Tirzah Kreisel, Michael London, Inbal Goshen

https://www.biorxiv.org/content/10.1101/682344v1

Ketamine anesthesia induces gain enhancement via recurrent excitation in granular input layers of the auditory cortex

Katrina E. Deane, Michael G. K. Brunk, Andrew W. Curran, Marina M. Zempeltzi, Jing Ma, Xiao Lin, Francesca Abela, Sümeyra Aksit, Matthias Deliano, Frank W. Ohl, Max F. K. Happel

https://www.biorxiv.org/content/10.1101/810978v2

Data-driven integration of hippocampal CA1 synapse physiology in silico

András Ecker, Armando Romani, Sára Sáray, Szabolcs Káli, Michele Migliore, Audrey Mercer, Henry Markram, Eilif Muller, Srikanth Ramaswamy

https://www.biorxiv.org/content/10.1101/716480v1

Sexually divergent effects of social dominance on chronic stress outcomes in mice

Stoyo Karamihalev, Elena Brivio, Cornelia Flachskamm, Rainer Stoffel, Mathias V. Schmidt, Alon Chen

https://www.biorxiv.org/content/10.1101/2020.02.04.933481v1

Resting-state functional connectivity predicts recovery from visually induced motion sickness

Jungo Miyazaki, Hiroki Yamamoto, Yoshikatsu Ichimura, Hiroyuki Yamashiro, Tomokazu Murase, Tetsuya Yamamoto, Masahiro Umeda, Toshihiro Higuchi

https://www.biorxiv.org/content/10.1101/2020.06.30.180786v1

The mRNA translation landscape in the synaptic neuropil

Caspar Glock, Anne Biever, Georgi Tushev, Ina Bartnik, Belquis Nassim-Assir, Susanne tom Dieck, Erin M. Schuman

https://www.biorxiv.org/content/10.1101/2020.06.09.141960v1

The Spatial Scale of Synaptic Protein Allocation during Homeostatic Plasticity

Chao Sun, Andreas Nold, Tatjana Tchumatchenko, Mike Heilemann, Erin M. Schuman

https://www.biorxiv.org/content/10.1101/2020.04.29.068833v1

Axon guidance at the midline – a live imaging perspective

Alexandre Dumoulin, Nikole R. Zuniga, Esther T. Stoeckli

https://www.biorxiv.org/content/10.1101/2020.07.20.211995v1

Categories: animal behavior and cognition , cell biology , developmental biology , molecular biology , neuroscience , pharmacology and toxicology , physiology

 

Posted on: 6th July 2020 , updated on: 22nd July 2020

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Also in the animal behavior and cognition category:

Bats

A list of preprints dealing with the ecology, evolution and behavior of bats

 



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FENS 2020

A collection of preprints presented during the virtual meeting of the Federation of European Neuroscience Societies (FENS) in 2020

 



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Planar Cell Polarity – PCP

This preList contains preprints about the latest findings on Planar Cell Polarity (PCP) in various model organisms at the molecular, cellular and tissue levels.

 



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BioMalPar XVI: Biology and Pathology of the Malaria Parasite

[under construction] Preprints presented at the (fully virtual) EMBL BioMalPar XVI, 17-18 May 2020 #emblmalaria

 



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Cell Polarity

Recent research from the field of cell polarity is summarized in this list of preprints. It comprises of studies focusing on various forms of cell polarity ranging from epithelial polarity, planar cell polarity to front-to-rear polarity.

 



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TAGC 2020

Preprints recently presented at the virtual Allied Genetics Conference, April 22-26, 2020. #TAGC20

 



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3D Gastruloids

A curated list of preprints related to Gastruloids (in vitro models of early development obtained by 3D aggregation of embryonic cells). Preprint missing? Don't hesitate to let us know.

 



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ECFG15 – Fungal biology

Preprints presented at 15th European Conference on Fungal Genetics 17-20 February 2020 Rome

 



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ASCB EMBO Annual Meeting 2019

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EMBL Seeing is Believing – Imaging the Molecular Processes of Life

Preprints discussed at the 2019 edition of Seeing is Believing, at EMBL Heidelberg from the 9th-12th October 2019

 



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Preprints on autophagy and lysosomal degradation and its role in neurodegeneration and disease. Includes molecular mechanisms, upstream signalling and regulation as well as studies on pharmaceutical interventions to upregulate the process.

 



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Cellular metabolism

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List by Pablo Ranea Robles

BSCB/BSDB Annual Meeting 2019

Preprints presented at the BSCB/BSDB Annual Meeting 2019

 



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MitoList

This list of preprints is focused on work expanding our knowledge on mitochondria in any organism, tissue or cell type, from the normal biology to the pathology.

 



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Biophysical Society Annual Meeting 2019

Few of the preprints that were discussed in the recent BPS annual meeting at Baltimore, USA

 



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ASCB/EMBO Annual Meeting 2018

This list relates to preprints that were discussed at the recent ASCB conference.

 



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Also in the developmental biology category:

EMBL Conference: From functional genomics to systems biology

Preprints presented at the virtual EMBL conference "from functional genomics and systems biology", 16-19 November 2020

 



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Single Cell Biology 2020

A list of preprints mentioned at the Wellcome Genome Campus Single Cell Biology 2020 meeting.

 



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Society for Developmental Biology 79th Annual Meeting

Preprints at SDB 2020

 



List by Irepan Salvador-Martinez, Martin Estermann

FENS 2020

A collection of preprints presented during the virtual meeting of the Federation of European Neuroscience Societies (FENS) in 2020

 



List by Ana Dorrego-Rivas

Planar Cell Polarity – PCP

This preList contains preprints about the latest findings on Planar Cell Polarity (PCP) in various model organisms at the molecular, cellular and tissue levels.

 



List by Ana Dorrego-Rivas

Cell Polarity

Recent research from the field of cell polarity is summarized in this list of preprints. It comprises of studies focusing on various forms of cell polarity ranging from epithelial polarity, planar cell polarity to front-to-rear polarity.

 



List by Yamini Ravichandran

TAGC 2020

Preprints recently presented at the virtual Allied Genetics Conference, April 22-26, 2020. #TAGC20

 



List by Maiko Kitaoka, Madhuja Samaddar, Miguel V. Almeida, Sejal Davla, Jennifer Ann Black, Dey Lab

3D Gastruloids

A curated list of preprints related to Gastruloids (in vitro models of early development obtained by 3D aggregation of embryonic cells). Preprint missing? Don't hesitate to let us know.

 



List by Paul Gerald L. Sanchez and Stefano Vianello

ASCB EMBO Annual Meeting 2019

A collection of preprints presented at the 2019 ASCB EMBO Meeting in Washington, DC (December 7-11)

 



List by Madhuja Samaddar, Ramona Jühlen, Amanda Haage, Laura McCormick, Maiko Kitaoka

EDBC Alicante 2019

Preprints presented at the European Developmental Biology Congress (EDBC) in Alicante, October 23-26 2019.

 



List by Sergio Menchero, Jesus Victorino, Teresa Rayon, Irepan Salvador-Martinez

EMBL Seeing is Believing – Imaging the Molecular Processes of Life

Preprints discussed at the 2019 edition of Seeing is Believing, at EMBL Heidelberg from the 9th-12th October 2019

 



List by Dey Lab

SDB 78th Annual Meeting 2019

A curation of the preprints presented at the SDB meeting in Boston, July 26-30 2019. The preList will be updated throughout the duration of the meeting.

 



List by Alex Eve

Lung Disease and Regeneration

This preprint list compiles highlights from the field of lung biology.

 



List by Rob Hynds

Young Embryologist Network Conference 2019

Preprints presented at the Young Embryologist Network 2019 conference, 13 May, The Francis Crick Institute, London

 



List by Alex Eve

Pattern formation during development

The aim of this preList is to integrate results about the mechanisms that govern patterning during development, from genes implicated in the processes to theoritical models of pattern formation in nature.

 



List by Alexa Sadier

BSCB/BSDB Annual Meeting 2019

Preprints presented at the BSCB/BSDB Annual Meeting 2019

 



List by Dey Lab

Zebrafish immunology

A compilation of cutting-edge research that uses the zebrafish as a model system to elucidate novel immunological mechanisms in health and disease.

 



List by Shikha Nayar

Also in the molecular biology category:

FENS 2020

A collection of preprints presented during the virtual meeting of the Federation of European Neuroscience Societies (FENS) in 2020

 



List by Ana Dorrego-Rivas

ECFG15 – Fungal biology

Preprints presented at 15th European Conference on Fungal Genetics 17-20 February 2020 Rome

 



List by Hiral Shah

ASCB EMBO Annual Meeting 2019

A collection of preprints presented at the 2019 ASCB EMBO Meeting in Washington, DC (December 7-11)

 



List by Madhuja Samaddar, Ramona Jühlen, Amanda Haage, Laura McCormick, Maiko Kitaoka

Lung Disease and Regeneration

This preprint list compiles highlights from the field of lung biology.

 



List by Rob Hynds

MitoList

This list of preprints is focused on work expanding our knowledge on mitochondria in any organism, tissue or cell type, from the normal biology to the pathology.

 



List by Sandra Franco Iborra

Also in the neuroscience category:

FENS 2020

A collection of preprints presented during the virtual meeting of the Federation of European Neuroscience Societies (FENS) in 2020

 



List by Ana Dorrego-Rivas

ASCB EMBO Annual Meeting 2019

A collection of preprints presented at the 2019 ASCB EMBO Meeting in Washington, DC (December 7-11)

 



List by Madhuja Samaddar, Ramona Jühlen, Amanda Haage, Laura McCormick, Maiko Kitaoka

SDB 78th Annual Meeting 2019

A curation of the preprints presented at the SDB meeting in Boston, July 26-30 2019. The preList will be updated throughout the duration of the meeting.

 



List by Alex Eve

Autophagy

Preprints on autophagy and lysosomal degradation and its role in neurodegeneration and disease. Includes molecular mechanisms, upstream signalling and regulation as well as studies on pharmaceutical interventions to upregulate the process.

 



List by Sandra Malmgren Hill

Young Embryologist Network Conference 2019

Preprints presented at the Young Embryologist Network 2019 conference, 13 May, The Francis Crick Institute, London

 



List by Alex Eve

Also in the pharmacology and toxicology category:

FENS 2020

A collection of preprints presented during the virtual meeting of the Federation of European Neuroscience Societies (FENS) in 2020

 



List by Ana Dorrego-Rivas

COVID-19 / SARS-CoV-2 preprints

List of important preprints dealing with the ongoing coronavirus outbreak. See http://covidpreprints.com for additional resources and timeline, and https://connect.biorxiv.org/relate/content/181 for full list of bioRxiv and medRxiv preprints on this topic

 



List by Dey Lab, Zhang-He Goh

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Drug use in special populations

Any drugs that are being used in special populations: Patients with liver and kidney failure, in paediatrics, in geriatrics, and in pregnant or lactating patients. Includes the discovery of factors that could potentially affect drug use in these special populations.

 



List by Zhang-He Goh

Toxicology of toxicants, existing therapeutics, and investigational drugs

Preprints that describe the toxicology of environmental pollutants and existing and upcoming drugs. Includes both toxicokinetics and toxicodynamics, as well as technological improvements that will help in the characterisation of this field.

 



List by Zhang-He Goh

Antimicrobials: Discovery, clinical use, and development of resistance

Preprints that describe the discovery of new antimicrobials and any improvements made regarding their clinical use. Includes preprints that detail the factors affecting antimicrobial selection and the development of antimicrobial resistance.

 



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Anticancer agents: Discovery and clinical use

Preprints that describe the discovery of anticancer agents and their clinical use. Includes both small molecules and macromolecules like biologics.

 



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Advances in Drug Delivery

Advances in formulation technology or targeted delivery methods that describe or develop the distribution of small molecules or large macromolecules to specific parts of the body.

 



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Also in the physiology category:

FENS 2020

A collection of preprints presented during the virtual meeting of the Federation of European Neuroscience Societies (FENS) in 2020

 



List by Ana Dorrego-Rivas

TAGC 2020

Preprints recently presented at the virtual Allied Genetics Conference, April 22-26, 2020. #TAGC20

 



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Autophagy

Preprints on autophagy and lysosomal degradation and its role in neurodegeneration and disease. Includes molecular mechanisms, upstream signalling and regulation as well as studies on pharmaceutical interventions to upregulate the process.

 



List by Sandra Malmgren Hill

Cellular metabolism

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List by Pablo Ranea Robles

Also in the animal behavior and cognition category:

InsectBrainDatabase - A unified platform to manage, share, and archive morphological and functional data

Stanley Heinze, Basil el Jundi, Bente G. Berg, et al.



Selected by Almut Kelber

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Sick Bats Stay Home Alone: Social distancing during the acute phase response in Egyptian fruit bats (Rousettus aegyptiacus)

Kelsey R. Moreno, Maya Weinberg, Lee Harten, et al.



Selected by Baheerathan Murugavel

Soaring styles of extinct giant birds and pterosaurs

Yusuke Goto, Ken Yoda, Henri Weimerskirch, et al.



Selected by Sophia Friesen

1

Also in the cell biology category:

Suppression of Plasmodium MIF-CD74 Signaling Protects Against Severe Malaria

Alvaro Baeza Garcia, Edwin Siu, Xin Du, et al.



Selected by Joao Mello-Vieira

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Investigating receptor-mediated antibody transcytosis using Blood-Brain Barrier organoid arrays

Claire Simonneau, Martina Duschmalé, Alina Gavrilov, et al.



Selected by Kristina Kuhbandner

Endothelial junctional membrane protrusions serve as hotspots for neutrophil transmigration

Janine J.G. Arts, Eike K. Mahlandt, Max L.B. Grönloh, et al.



Selected by Jonny Coates

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Also in the developmental biology category:

Human-specific ARHGAP11B is necessary and sufficient for human-type basal progenitor levels in primate brain organoids

Jan Fischer, Jula Peters, Takashi Namba, et al.



Selected by Ana Uzquiano

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The chromatin, topological and regulatory properties of pluripotency-associated poised enhancers are conserved in vivo

Giuliano Crispatzu, Rizwan Rehimi, Tomas Pachano, et al.



Selected by Sergio Menchero

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Ciliary control of meiotic chromosomal pairing mechanics and germ cell morphogenesis

Avishag Mytils, Vineet Kumar, Qiu Tao, et al.



Selected by Robert Mahen

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Also in the molecular biology category:

The chromatin, topological and regulatory properties of pluripotency-associated poised enhancers are conserved in vivo

Giuliano Crispatzu, Rizwan Rehimi, Tomas Pachano, et al.



Selected by Sergio Menchero

1

Transgenerational Regulation of Sexual Attractiveness in C. elegans Nematodes

Itai Antoine Toker, Itamar Lev, Yael Mor, et al.



Selected by Yasmin Lau

The context-dependent, combinatorial logic of BMP signaling

Heidi Klumpe, Matthew A. Langley, James M. Linton, et al.



Selected by Meng Zhu

1

Also in the neuroscience category:

Human-specific ARHGAP11B is necessary and sufficient for human-type basal progenitor levels in primate brain organoids

Jan Fischer, Jula Peters, Takashi Namba, et al.



Selected by Ana Uzquiano

1

InsectBrainDatabase - A unified platform to manage, share, and archive morphological and functional data

Stanley Heinze, Basil el Jundi, Bente G. Berg, et al.



Selected by Almut Kelber

1

Investigating receptor-mediated antibody transcytosis using Blood-Brain Barrier organoid arrays

Claire Simonneau, Martina Duschmalé, Alina Gavrilov, et al.



Selected by Kristina Kuhbandner

Also in the pharmacology and toxicology category:

The Design, Synthesis, and Evaluation of Hypoxia-Activated Prodrugs of the KDAC Inhibitor Panobinostat

Ewen Calder, Anna Skwarska, Deborah Sneddon, et al.



Selected by Zhang-He Goh

Bacteriological and histopathological findings in cetaceans that stranded in the Philippines from 2017 to 2018

Marie Christine M. Obusan, Jamaica Ann A. Caras, Lara Sabrina L. Lumang, et al.



Selected by Paul Gerald L. Sanchez and Stefano Vianello

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Bromodomain Inhibition Blocks Inflammation-Induced Cardiac Dysfunction and SARS-CoV2 Infection in Pre-Clinical Models

Richard J Mills, Sean J Humphrey, Patrick RJ Fortuna, et al.



Selected by Alexander Ward, Osvaldo Contreras

1

Also in the physiology category:

Skeletal muscle mitochondrial dysfunction in mice is linked to bone loss via the bone marrow immune microenvironment

Jingwen Tian, Ji Sun Moon, Ha Thi Nga, et al.



Selected by Andrea Irazoki

Ciliary control of meiotic chromosomal pairing mechanics and germ cell morphogenesis

Avishag Mytils, Vineet Kumar, Qiu Tao, et al.



Selected by Robert Mahen

1

Intraspecific variation in thermal tolerance differs between tropical and temperate fishes

J.J.H. Nati, M.B.S. Svendsen, S. Marras, et al.



Selected by Charlotte Nelson
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