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ASCB EMBO Annual Meeting 2019

A collection of preprints presented at the 2019 ASCB EMBO Meeting in Washington, DC (December 7-11)

List by Madhuja Samaddar, Ramona Jühlen, Amanda Haage, Laura McCormick, Maiko Kitaoka

Preprints:

Mitochondrial volume fraction and translation speed impact mRNA localization and production of nuclear-encoded mitochondrial proteins

Tatsuhisa Tsuboi, Matheus P. Viana, Fan Xu, Jingwen Yu, Raghav Chanchani, Ximena G. Arceo, Evelina Tutucci, Joonhyuk Choi, Yang S. Chen, Robert H. Singer, Susanne M. Rafelski, Brian M. Zid

https://www.biorxiv.org/content/10.1101/529289v2

WAVE complex self-organization templates lamellipodial formation

Anne Pipathsouk, Rachel M. Brunetti, Jason P. Town, Artù Breuer, Patrina A. Pellett, Kyle Marchuk, Ngoc-Han T. Tran, Matthew F. Krummel, Dimitrios Stamou, Orion D. Weiner

https://www.biorxiv.org/content/10.1101/836585v1

Exploring endocytic compartment morphology with systematic genetics and single cell image analysis

Mojca Mattiazzi Usaj, Nil Sahin, Helena Friesen, Carles Pons, Matej Usaj, Myra Paz Masinas, Ermira Shuteriqi, Aleksei Shkurin, Patrick Aloy, Quaid Morris, Charles Boone, Brenda J. Andrews

https://www.biorxiv.org/content/10.1101/724989v1

Correlative three-dimensional super-resolution and block face electron microscopy of whole vitreously frozen cells

David P. Hoffman, Gleb Shtengel, C. Shan Xu, Kirby R. Campbell, Melanie Freeman, Lei Wang, Daniel E. Milkie, H. Amalia Pasolli, Nirmala Iyer, John A. Bogovic, Daniel R. Stabley, Abbas Shirinifard, Song Pang, David Peale, Kathy Schaefer, Wim Pomp, Chi-Lun Chang, Jennifer Lippincott-Schwartz, Tom Kirchhausen, David J. Solecki, Eric Betzig, Harald Hess

https://www.biorxiv.org/content/10.1101/773986v1

The Glycolytic Protein Phosphofructokinase Dynamically Relocalizes into Subcellular Compartments with Liquid-like Properties in vivo

SoRi Jang, Zhao Xuan, Ross C. Lagoy, Louise M. Jawerth, Ian Gonzalez, Milind Singh, Shavanie Prashad, Hee Soo Kim, Avinash Patel, Dirk R. Albrecht, Anthony A. Hyman, Daniel A. Colón-Ramos

https://www.biorxiv.org/content/10.1101/636449v1

Biophysical properties of intermediate states of EMT outperform both epithelial and mesenchymal states

Yoran Margaron, Tomoaki Nagai, Laurent Guyon, Laetitia Kurzawa, Anne-Pierre Morel, Alice Pinheiro, Laurent Blanchoin, Fabien Reyal, Alain Puisieux, Manuel Théry

https://www.biorxiv.org/content/10.1101/797654v1

Cross-kingdom recognition of bacterial small RNAs induces transgenerational pathogenic avoidance

Rachel Kaletsky, Rebecca S. Moore, Lance L. Parsons, Coleen T. Murphy

https://www.biorxiv.org/content/10.1101/697888v1

Self-assembly of multi-component mitochondrial nucleoids via phase separation

Marina Feric, Tyler G. Demarest, Jane Tian, Deborah L. Croteau, Vilhelm A. Bohr, Tom Misteli

https://www.biorxiv.org/content/10.1101/822858v2

Material aging causes centrosome weakening and disassembly during mitotic exit

Matthäus Mittasch, Vanna M. Tran, Manolo U. Rios, Anatol W. Fritsch, Stephen J. Enos, Beatriz Ferreira Gomes, Alec Bond, Moritz Kreysing, Jeffrey B. Woodruff

https://www.biorxiv.org/content/10.1101/866434v1

Spatial control of nucleoporin assembly by Fragile X-related proteins

Arantxa Agote-Arán, Stephane Schmucker, Katerina Jerabkova, Inès Jmel Boyer, Alessandro Berto, Laura Pacini, Paolo Ronchi, Charlotte Kleiss, Laurent Guerard, Yannick Schwab, Hervé Moine, Jean-Louis Mandel, Sebastien Jacquemont, Claudia Bagni, Izabela Sumara

https://www.biorxiv.org/content/10.1101/767202v1

Cohesin and condensin extrude loops in a cell-cycle dependent manner

Stefan Golfier, Thomas Quail, Hiroshi Kimura, Jan Brugués

https://www.biorxiv.org/content/10.1101/821306v1

Transposable elements drive reorganisation of 3D chromatin during early embryogenesis

Kai Kruse, Noelia Díaz, Rocio Enriquez-Gasca, Xavier Gaume, Maria-Elena Torres-Padilla, Juan M. Vaquerizas

https://www.biorxiv.org/content/10.1101/523712v1

A chromosome folding intermediate at the condensin-to-cohesin transition during telophase

Kristin Abramo, Anne-Laure Valton, Sergey V. Venev, Hakan Ozadam, A. Nicole Fox, Job Dekker

https://www.biorxiv.org/content/10.1101/678474v1

Cryo-ET analysis of budding yeast synaptonemal complexes in situ

Olivia X. Ma, Shujun Cai, Jian Shi, Lu Gan

https://www.biorxiv.org/content/10.1101/746982v1

Nuclear actin cable with multiple branches during yeast meiosis

Tomoko Takagi, Masako Osumi, Akira Shinohara

https://www.biorxiv.org/content/10.1101/778100v1

Mutant lamins cause nuclear envelope rupture and DNA damage in skeletal muscle cells

Ashley J. Earle, Tyler J. Kirby, Gregory R. Fedorchak, Philipp Isermann, Jineet Patel, Sushruta Iruvanti, Steven A. Moore, Gisèle Bonne, Lori L. Wallrath, Jan Lammerding

https://www.biorxiv.org/content/10.1101/364778v5

Unrestrained ESCRT-III drives chromosome fragmentation and micronuclear catastrophe

Marina Vietri, Sebastian W. Schultz, Aurélie Bellanger, Carl M. Jones, Camilla Raiborg, Ellen Skarpen, Christeen Ramane J. Pedurupillay, Eline Kip, Romy Timmer, Ashish Jain, Philippe Collas, Roland L. Knorr, Sushma N. Grellscheid, Halim Kusumaatmaja, Andreas Brech, Francesca Micci, Harald Stenmark, Coen Campsteijn

https://www.biorxiv.org/content/10.1101/517011v1

An ESCRT-LEM domain inner nuclear membrane protein surveillance system is poised to directly monitor the integrity of the nuclear envelope barrier and nuclear transport system

David J. Thaller, Matteo Allegretti, Sapan Borah, Paolo Ronchi, Martin Beck, C. Patrick Lusk

https://www.biorxiv.org/content/10.1101/523670v1

Cytoplasmic volume and limiting nucleoplasmin scale nuclear size during Xenopus laevis development

Pan Chen, Miroslav Tomschik, Katherine Nelson, John Oakey, J. C. Gatlin, Daniel L. Levy

https://www.biorxiv.org/content/10.1101/511451v1

Centrosome and ciliary abnormalities in fetal akinesia deformation sequence human fibroblasts

Ramona Jühlen, Jeroen Breckpot, Birthe Fahrenkrog

https://www.biorxiv.org/content/10.1101/756734v1

Mitochondrial volume fraction and translation speed impact mRNA localization and production of nuclear-encoded mitochondrial proteins

Tatsuhisa Tsuboi, Matheus P. Viana, Fan Xu, Jingwen Yu, Raghav Chanchani, Ximena G. Arceo, Evelina Tutucci, Joonhyuk Choi, Yang S. Chen, Robert H. Singer, Susanne M. Rafelski, Brian M. Zid

https://www.biorxiv.org/content/10.1101/529289v2

Novel cytokinetic ring components limit RhoA activity and contractility

Kathryn Rehain Bell, Michael E. Werner, Anusha Doshi, Daniel B. Cortes, Adam Sattler, Thanh Vuong-Brender, Michel Labouesse, Amy Shaub Maddox

https://www.biorxiv.org/content/10.1101/633743v1

Insights from a survey-based analysis of the academic job market

Jason D. Fernandes, Sarvenaz Sarabipour, Christopher T. Smith, Natalie M. Niemi, Nafisa M. Jadavji, Ariangela J. Kozik, Alex S. Holehouse, Vikas Pejaver, Orsolya Symmons, Alexandre W. Bisson Filho, Amanda Haage

https://www.biorxiv.org/content/10.1101/796466v2

Twinfilin uncaps filament barbed ends to promote turnover of lamellipodial actin networks

Markku Hakala, Hugo Wioland, Mari Tolonen, Antoine Jegou, Guillaume Romet-Lemonne, Pekka Lappalainen

https://www.biorxiv.org/content/10.1101/864769v1

CLASP mediates microtubule repair by promoting tubulin incorporation into damaged lattices

Amol Aher, Dipti Rai, Laura Schaedel, Jeremie Gaillard, Karin John, Laurent Blanchoin, Manuel Thery, Anna Akhmanova

https://www.biorxiv.org/content/10.1101/809251v1.article-info

A Combinatorial MAP Code Dictates Polarized Microtubule Transport

Brigette Y. Monroy, Tracy C. Tan, Janah May Oclaman, Jisoo S. Han, Sergi Simo, Dan W. Nowakowski, Richard J. McKenney, Kassandra M. Ori-McKenney

https://www.biorxiv.org/content/10.1101/731604v1

Connectivity analysis of GEF/GTPase networks in living cells

D.J. Marston, M. Vilela, Jinqi Ren, George Glekas, Mihai Azotei, G. Danuser, J. Sondek, K.M. Hahn

https://www.biorxiv.org/content/10.1101/728998v1

Profilin 1 Controls the Assembly, Organization, and Dynamics of Leading Edge Actin Structures Through Internetwork Competition and Collaboration

Kristen Skruber, Peyton V. Warp, Rachael Shklyarov, James D. Thomas, Maurice S. Swanson, Jessica L. Henty-Ridilla, Tracy-Ann Read, Eric A. Vitriol

https://www.biorxiv.org/content/10.1101/849356v1

The mitotic crosslinking protein PRC1 acts as a mechanical dashpot to resist microtubule sliding

Ignas Gaska, Mason Armstrong, April Alfieri, Scott Forth

https://www.biorxiv.org/content/10.1101/2019.12.12.874529v1

Unconventional kinetochore kinases KKT2 and KKT3 have a unique zinc finger that promotes their kinetochore localization

Gabriele Marcianò, Olga O. Nerusheva, Midori Ishii, Bungo Akiyoshi

https://www.biorxiv.org/content/10.1101/2019.12.13.875419v1

Cryo-ET analysis of budding yeast synaptonemal complexes in situ

Olivia X. Ma, Shujun Cai, Jian Shi, Lu Gan

https://www.biorxiv.org/content/10.1101/746982v1

PCH-2TRIP13 regulates spindle checkpoint strength

Lénaïg Défachelles, Anna E. Russo, Christian R. Nelson, Needhi Bhalla

https://www.biorxiv.org/content/10.1101/389080v3

A deeper understanding of intestinal organoid metabolism revealed by combining fluorescence lifetime imaging microscopy (FLIM) and extracellular flux analyses

Irina A. Okkelman, Nuno Neto, Dmitri B. Papkovsky, Michael Monaghan, Ruslan I. Dmitriev

https://www.biorxiv.org/content/10.1101/771188v1

Categories: biochemistry , bioengineering , biophysics , cancer biology , cell biology , developmental biology , molecular biology , neuroscience , scientific communication and education , systems biology

 

Posted on: 8 December 2019 , updated on: 20 December 2019

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List by Martin Estermann

Alumni picks – preLights 5th Birthday

This preList contains preprints that were picked and highlighted by preLights Alumni - an initiative that was set up to mark preLights 5th birthday. More entries will follow throughout February and March 2023.

 



List by Sergio Menchero et al.

CellBio 2022 – An ASCB/EMBO Meeting

This preLists features preprints that were discussed and presented during the CellBio 2022 meeting in Washington, DC in December 2022.

 



List by Nadja Hümpfer et al.

EMBL Synthetic Morphogenesis: From Gene Circuits to Tissue Architecture (2021)

A list of preprints mentioned at the #EESmorphoG virtual meeting in 2021.

 



List by Alex Eve

FENS 2020

A collection of preprints presented during the virtual meeting of the Federation of European Neuroscience Societies (FENS) in 2020

 



List by Ana Dorrego-Rivas

ECFG15 – Fungal biology

Preprints presented at 15th European Conference on Fungal Genetics 17-20 February 2020 Rome

 



List by Hiral Shah

ASCB EMBO Annual Meeting 2019

A collection of preprints presented at the 2019 ASCB EMBO Meeting in Washington, DC (December 7-11)

 



List by Madhuja Samaddar et al.

Lung Disease and Regeneration

This preprint list compiles highlights from the field of lung biology.

 



List by Rob Hynds

MitoList

This list of preprints is focused on work expanding our knowledge on mitochondria in any organism, tissue or cell type, from the normal biology to the pathology.

 



List by Sandra Franco Iborra

Also in the neuroscience category:

2024 Hypothalamus GRC

This 2024 Hypothalamus GRC (Gordon Research Conference) preList offers an overview of cutting-edge research focused on the hypothalamus, a critical brain region involved in regulating homeostasis, behavior, and neuroendocrine functions. The studies included cover a range of topics, including neural circuits, molecular mechanisms, and the role of the hypothalamus in health and disease. This collection highlights some of the latest advances in understanding hypothalamic function, with potential implications for treating disorders such as obesity, stress, and metabolic diseases.

 



List by Nathalie Krauth

‘In preprints’ from Development 2022-2023

A list of the preprints featured in Development's 'In preprints' articles between 2022-2023

 



List by Alex Eve, Katherine Brown

CSHL 87th Symposium: Stem Cells

Preprints mentioned by speakers at the #CSHLsymp23

 



List by Alex Eve

Journal of Cell Science meeting ‘Imaging Cell Dynamics’

This preList highlights the preprints discussed at the JCS meeting 'Imaging Cell Dynamics'. The meeting was held from 14 - 17 May 2023 in Lisbon, Portugal and was organised by Erika Holzbaur, Jennifer Lippincott-Schwartz, Rob Parton and Michael Way.

 



List by Helen Zenner

FENS 2020

A collection of preprints presented during the virtual meeting of the Federation of European Neuroscience Societies (FENS) in 2020

 



List by Ana Dorrego-Rivas

ASCB EMBO Annual Meeting 2019

A collection of preprints presented at the 2019 ASCB EMBO Meeting in Washington, DC (December 7-11)

 



List by Madhuja Samaddar et al.

SDB 78th Annual Meeting 2019

A curation of the preprints presented at the SDB meeting in Boston, July 26-30 2019. The preList will be updated throughout the duration of the meeting.

 



List by Alex Eve

Autophagy

Preprints on autophagy and lysosomal degradation and its role in neurodegeneration and disease. Includes molecular mechanisms, upstream signalling and regulation as well as studies on pharmaceutical interventions to upregulate the process.

 



List by Sandra Malmgren Hill

Young Embryologist Network Conference 2019

Preprints presented at the Young Embryologist Network 2019 conference, 13 May, The Francis Crick Institute, London

 



List by Alex Eve

Also in the systems biology category:

2024 Hypothalamus GRC

This 2024 Hypothalamus GRC (Gordon Research Conference) preList offers an overview of cutting-edge research focused on the hypothalamus, a critical brain region involved in regulating homeostasis, behavior, and neuroendocrine functions. The studies included cover a range of topics, including neural circuits, molecular mechanisms, and the role of the hypothalamus in health and disease. This collection highlights some of the latest advances in understanding hypothalamic function, with potential implications for treating disorders such as obesity, stress, and metabolic diseases.

 



List by Nathalie Krauth

‘In preprints’ from Development 2022-2023

A list of the preprints featured in Development's 'In preprints' articles between 2022-2023

 



List by Alex Eve, Katherine Brown

EMBL Synthetic Morphogenesis: From Gene Circuits to Tissue Architecture (2021)

A list of preprints mentioned at the #EESmorphoG virtual meeting in 2021.

 



List by Alex Eve

Single Cell Biology 2020

A list of preprints mentioned at the Wellcome Genome Campus Single Cell Biology 2020 meeting.

 



List by Alex Eve

EMBL Seeing is Believing – Imaging the Molecular Processes of Life

Preprints discussed at the 2019 edition of Seeing is Believing, at EMBL Heidelberg from the 9th-12th October 2019

 



List by Dey Lab

Pattern formation during development

The aim of this preList is to integrate results about the mechanisms that govern patterning during development, from genes implicated in the processes to theoritical models of pattern formation in nature.

 



List by Alexa Sadier

Also in the biochemistry category:

Triglyceride metabolism controls inflammation and APOE4-associated disease states in microglia

Roxan A. Stephenson, Kory R. Johnson, Linling Cheng, et al.

Selected by 22 August 2024

Gustavo Stelzer, Marcus Oliveira

Biochemistry

Impaired 26S proteasome causes learning and memory deficiency and induces neuroinflammation mediated by NF-κB in mice

Christa C. Huber, Eduardo Callegari, Maria Paez, et al.

Selected by 22 August 2024

Gustavo Stelzer, Marcus Oliveira

Biochemistry

Notch3 is a genetic modifier of NODAL signalling for patterning asymmetry during mouse heart looping

Tobias Holm Bønnelykke, Marie-Amandine Chabry, Emeline Perthame, et al.

Selected by 06 June 2024

Bhaval Parmar

Developmental Biology

Also in the bioengineering category:

Green synthesized silver nanoparticles from Moringa: Potential for preventative treatment of SARS-CoV-2 contaminated water

Adebayo J. Bello, Omorilewa B. Ebunoluwa, Rukayat O. Ayorinde, et al.

Selected by 14 November 2024

Safieh Shah, Benjamin Dominik Maier

Epidemiology

Engineered Nanotopographies Induce Transient Openings in the Nuclear Membrane

Einollah Sarikhani, Vrund Patel, Zhi Li, et al.

Selected by 23 September 2024

Sristilekha Nath

Bioengineering

Scalable and efficient generation of mouse primordial germ cell-like cells

Xinbao Ding, Liangdao Li, Jingyi Gao, et al.

Selected by 05 March 2024

Carly Guiltinan

Cell Biology

Also in the biophysics category:

Motor Clustering Enhances Kinesin-driven Vesicle Transport

Rui Jiang, Qingzhou Feng, Daguan Nong, et al.

Selected by 16 November 2024

Sharvari Pitke

Biophysics

Global coordination of protrusive forces in migrating immune cells

Patricia Reis-Rodrigues, Nikola Canigova, Mario J. Avellaneda, et al.

Selected by 10 October 2024

yohalie kalukula

Biophysics

Engineered Nanotopographies Induce Transient Openings in the Nuclear Membrane

Einollah Sarikhani, Vrund Patel, Zhi Li, et al.

Selected by 23 September 2024

Sristilekha Nath

Bioengineering

Also in the cancer biology category:

Integrin conformation-dependent neutrophil slowing obstructs the capillaries of the pre-metastatic lung in a model of breast cancer

Frédéric Fercoq, Gemma S. Cairns, Marco De Donatis, et al.

Selected by 07 October 2024

Simon Cleary

Cancer Biology

Mitochondria-derived nuclear ATP surge protects against confinement-induced proliferation defects

Ritobrata Ghose, Fabio Pezzano, Savvas Kourtis, et al.

Selected by 16 May 2024

Teodora Piskova

Cell Biology

Spatial transcriptomics elucidates medulla niche supporting germinal center response in myasthenia gravis thymoma

Yoshiaki Yasumizu, Makoto Kinoshita, Martin Jinye Zhang, et al.

Selected by 27 March 2024

Jessica Chevallier

Immunology

Also in the cell biology category:

Germplasm stability in zebrafish requires maternal Tdrd6a and Tdrd6c

Alessandro Consorte, Yasmin El Sherif, Fridolin Kielisch, et al.

Selected by 13 December 2024

Justin Gutkowski

Developmental Biology

Leukocytes use endothelial membrane tunnels to extravasate the vasculature

Werner J. van der Meer, Abraham C.I. van Steen, Eike Mahlandt, et al.

Selected by 08 December 2024

Felipe Del Valle Batalla

Cell Biology

Platelet-derived LPA16:0 inhibits adult neurogenesis and stress resilience in anxiety disorder

Thomas Larrieu, Charline Carron, Fabio Grieco, et al.

Selected by 04 December 2024

Harvey Roweth

Neuroscience

Also in the developmental biology category:

Germplasm stability in zebrafish requires maternal Tdrd6a and Tdrd6c

Alessandro Consorte, Yasmin El Sherif, Fridolin Kielisch, et al.

Selected by 13 December 2024

Justin Gutkowski

Developmental Biology

Cellular signalling protrusions enable dynamic distant contacts in spinal cord neurogenesis

Joshua Hawley, Robert Lea, Veronica Biga, et al.

Selected by 15 November 2024

Ankita Walvekar

Developmental Biology

Actin-based deformations of the nucleus control multiciliated ependymal cell differentiation

Marianne Basso, Alexia Mahuzier, Syed Kaabir Ali, et al.

Selected by 30 October 2024

Ryan Harrison

Developmental Biology

Also in the molecular biology category:

Germplasm stability in zebrafish requires maternal Tdrd6a and Tdrd6c

Alessandro Consorte, Yasmin El Sherif, Fridolin Kielisch, et al.

Selected by 13 December 2024

Justin Gutkowski

Developmental Biology

Platelet-derived LPA16:0 inhibits adult neurogenesis and stress resilience in anxiety disorder

Thomas Larrieu, Charline Carron, Fabio Grieco, et al.

Selected by 04 December 2024

Harvey Roweth

Neuroscience

Green synthesized silver nanoparticles from Moringa: Potential for preventative treatment of SARS-CoV-2 contaminated water

Adebayo J. Bello, Omorilewa B. Ebunoluwa, Rukayat O. Ayorinde, et al.

Selected by 14 November 2024

Safieh Shah, Benjamin Dominik Maier

Epidemiology

Also in the neuroscience category:

Platelet-derived LPA16:0 inhibits adult neurogenesis and stress resilience in anxiety disorder

Thomas Larrieu, Charline Carron, Fabio Grieco, et al.

Selected by 04 December 2024

Harvey Roweth

Neuroscience

Investigating Mechanically Activated Currents from Trigeminal Neurons of Non-Human Primates

Karen A Lindquist, Jennifer Mecklenburg, Anahit H. Hovhannisyan, et al.

Selected by 04 December 2024

Vanessa Ehlers

Neuroscience

Circadian modulation of mosquito host-seeking persistence by Pigment-Dispersing Factor impacts daily biting patterns

Linhan Dong, Richard Hormigo, Jord M. Barnett, et al.

Selected by 29 November 2024

Javier Cavieres

Neuroscience

Also in the scientific communication and education category:

An updated and expanded characterization of the biological sciences academic job market

Brooklynn Flynn, Ariangela J. Kozik, You Cheng, et al.

Selected by 01 October 2024

Jennifer Ann Black et al.

Scientific Communication and Education

Have AI-Generated Texts from LLM Infiltrated the Realm of Scientific Writing? A Large-Scale Analysis of Preprint Platforms

Huzi Cheng, Bin Sheng, Aaron Lee, et al.

Selected by 13 July 2024

Amy Manson et al.

Scientific Communication and Education

Sci-comm “behind the scenes”: Gendered narratives of scientific outreach activities in the life sciences

Perry G. Beasley-Hall, Pam Papadelos, Anne Hewitt, et al.

Selected by 10 July 2024

Martin Estermann et al.

Scientific Communication and Education

Also in the systems biology category:

Modular control of time and space during vertebrate axis segmentation

Ali Seleit, Ian Brettell, Tomas Fitzgerald, et al.

AND

Natural genetic variation quantitatively regulates heart rate and dimension

Jakob Gierten, Bettina Welz, Tomas Fitzgerald, et al.

Selected by 24 June 2024

Girish Kale, Jennifer Ann Black

Developmental Biology

Expressive modeling and fast simulation for dynamic compartments

Till Köster, Philipp Henning, Tom Warnke, et al.

Selected by 18 April 2024

Benjamin Dominik Maier

Systems Biology

Clusters of lineage-specific genes are anchored by ZNF274 in repressive perinucleolar compartments

Martina Begnis, Julien Duc, Sandra Offner, et al.

Selected by 10 April 2024

Silvia Carvalho

Cell Biology
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