Menu

Close
Close

preLights is supported by…

Related posts

Related preLists

ECFG15 – Fungal biology

Preprints presented at 15th European Conference on Fungal Genetics 17-20 February 2020 Rome

List by Hiral Shah

Preprints:

A hierarchical transcriptional network controls appressorium-mediated plant infection by the rice blast fungus Magnaporthe oryzae

Miriam Oses-Ruiz, Magdalena Martin-Urdiroz, Darren M Soanes, Michael J Kershaw, Neftaly Cruz-Mireles, Guadalupe Valdovinos-Ponce, Camilla Molinari, George R Littlejohn, Paul Derbyshire, Frank Menke, Barbara Valent, Nicholas J Talbot

https://www.biorxiv.org/content/10.1101/2020.02.05.936203v1

MAP kinase Pmk1, and transcriptionn factors Hox7 and Mst12 establish a hierarchy of global regulators required for infection cell development in the rice blast fungus

More filtering on SNP calling does not remove evidence of inter-nucleus recombination in dikaryotic arbuscular mycorrhizal fungi

Eric C.H. Chen, Stephanie Mathieu, Anne Hoffrichter, Jeanne Ropars, Steven Dreissig, Jörg Fuchs, Andreas Brachmann, Nicolas Corradi

https://www.biorxiv.org/content/10.1101/2020.01.15.906412v1

Signatures of recombination detected in mycorrhizal fungus Rhizophagus despite stringent re-analysis

Multiplex genetic engineering exploiting pyrimidine salvage pathway-based self-encoded selectable markers

Lukas Birštonas, Alex Dallemulle, Manuel S. López-Berges, Ilse D. Jacobsen, Martin Offterdinger, Beate Abt, Maria Straßburger, Ingo Bauer, Oliver Schmidt, Bettina Sarg, Herbert Lindner, Hubertus Haas, Fabio Gsaller

https://www.biorxiv.org/content/10.1101/2020.01.16.908764v2

New self-encoded selectable markers for genome integration in Aspergillus with no effects on growth and virulence

Natural diversity in the predatory behavior facilitates the establishment of a new robust model strain for nematode-trapping fungi

Ching-Ting Yang, Guillermo Vidal-Diez de Ulzurrun, A. Pedro Gonçalves, Hung-Che Lin, Ching-Wen Chang, Tsung-Yu Huang, Sheng-An Chen, Cheng-Kuo Lai, Isheng J. Tsai, Frank C. Schroeder, Jason E. Stajich, Yen-Ping Hsueh

https://www.biorxiv.org/content/10.1101/843698v1

Wild isolates of carnivorous fungi of Arthrobotrys species vary in their ability to trap and kill worms.  G protein signalling is key to the response.

Human neutrophils produce antifungal extracellular vesicles against Aspergillus fumigatus

Iordana A. Shopova, Ivan Belyaev, Prasad Dasari, Susanne Jahreis, Maria C. Stroe, Zoltán Cseresnyés, Ann-Kathrin Zimmermann, Anna Medyukhina, Carl-Magnus Svensson, Thomas Krüger, Viktòria Szeifert, Sandor Nietzsche, Theresia Conrad, Matthew G. Blango, Olaf Kniemeyer, Marie von Lilienfeld-Toal, Peter F. Zipfel, Erzsébet Ligeti, Marc Thilo Figge, Axel A. Brakhage

https://www.biorxiv.org/content/10.1101/620294v2

Neutrophils release extracellular vesicles loaded with antifungals in response to Aspergilus fumigatus attack. The vesicles enter the fungal hyphae and interfere with fungal cell wall integrity. A new mechanism of human immune response against fungi.

Septins coordinate cell wall integrity and lipid metabolism in a sphingolipid-dependent process

Alexander Mela, Michelle Momany

https://www.biorxiv.org/content/10.1101/2020.02.09.940718v1

Sphingolipid metabolism regulates the assembly of cytoskeletal GTPases, septins,  at sites of  membrane and cell wall remodelling  in Aspergillus nidulans.

Chromatin features define adaptive genomic regions in a fungal plant pathogen

David E. Cook, Martin Kramer, Michael F. Seidl, Bart PHJ Thomma

https://www.biorxiv.org/content/10.1101/2020.01.27.921486v1

Methylation marks the lineage specific regions to create a hybrid chromatin state in the vascular wilt fungus Verticillium dahliae

Categories: cell biology , evolutionary biology , genetics , microbiology , molecular biology , pathology

 

Posted on: 21st February 2020

(1 votes)




    • Have your say

    Your email address will not be published. Required fields are marked *

    This site uses Akismet to reduce spam. Learn how your comment data is processed.

    Sign up to customise the site to your preferences and to receive alerts

    Register here

    Also in the cell biology category:

    Planar Cell Polarity – PCP

    This preList contains preprints about the latest findings on Planar Cell Polarity (PCP) in various model organisms at the molecular, cellular and tissue levels.

     



    List by Ana Dorrego-Rivas

    BioMalPar XVI: Biology and Pathology of the Malaria Parasite

    [under construction] Preprints presented at the (fully virtual) EMBL BioMalPar XVI, 17-18 May 2020 #emblmalaria

     



    List by Gautam Dey, Samantha Seah

    1

    Cell Polarity

    Recent research from the field of cell polarity is summarized in this list of preprints. It comprises of studies focusing on various forms of cell polarity ranging from epithelial polarity, planar cell polarity to front-to-rear polarity.

     



    List by Yamini Ravichandran

    TAGC 2020

    Preprints recently presented at the virtual Allied Genetics Conference, April 22-26, 2020. #TAGC20

     



    List by Maiko Kitaoka, Madhuja Samaddar, Miguel V. Almeida, Sejal Davla, Jennifer Ann Black, Gautam Dey

    3D Gastruloids

    A curated list of preprints related to Gastruloids (in vitro models of early development obtained by 3D aggregation of embryonic cells)

     



    List by Paul Gerald L. Sanchez and Stefano Vianello

    ASCB EMBO Annual Meeting 2019

    A collection of preprints presented at the 2019 ASCB EMBO Meeting in Washington, DC (December 7-11)

     



    List by Madhuja Samaddar, Ramona Jühlen, Amanda Haage, Laura McCormick, Maiko Kitaoka

    EMBL Seeing is Believing – Imaging the Molecular Processes of Life

    Preprints discussed at the 2019 edition of Seeing is Believing, at EMBL Heidelberg from the 9th-12th October 2019

     



    List by Gautam Dey

    Autophagy

    Preprints on autophagy and lysosomal degradation and its role in neurodegeneration and disease. Includes molecular mechanisms, upstream signalling and regulation as well as studies on pharmaceutical interventions to upregulate the process.

     



    List by Sandra Malmgren Hill

    Lung Disease and Regeneration

    This preprint list compiles highlights from the field of lung biology.

     



    List by Rob Hynds

    Cellular metabolism

    A curated list of preprints related to cellular metabolism at Biorxiv by Pablo Ranea Robles from the Prelights community. Special interest on lipid metabolism, peroxisomes and mitochondria.

     



    List by Pablo Ranea Robles

    BSCB/BSDB Annual Meeting 2019

    Preprints presented at the BSCB/BSDB Annual Meeting 2019

     



    List by Gautam Dey

    MitoList

    This list of preprints is focused on work expanding our knowledge on mitochondria in any organism, tissue or cell type, from the normal biology to the pathology.

     



    List by Sandra Franco Iborra

    Biophysical Society Annual Meeting 2019

    Few of the preprints that were discussed in the recent BPS annual meeting at Baltimore, USA

     



    List by Joseph Jose Thottacherry

    ASCB/EMBO Annual Meeting 2018

    This list relates to preprints that were discussed at the recent ASCB conference.

     



    List by Gautam Dey, Amanda Haage

    Also in the evolutionary biology category:

    Planar Cell Polarity – PCP

    This preList contains preprints about the latest findings on Planar Cell Polarity (PCP) in various model organisms at the molecular, cellular and tissue levels.

     



    List by Ana Dorrego-Rivas

    TAGC 2020

    Preprints recently presented at the virtual Allied Genetics Conference, April 22-26, 2020. #TAGC20

     



    List by Maiko Kitaoka, Madhuja Samaddar, Miguel V. Almeida, Sejal Davla, Jennifer Ann Black, Gautam Dey

    ECFG15 – Fungal biology

    Preprints presented at 15th European Conference on Fungal Genetics 17-20 February 2020 Rome

     



    List by Hiral Shah

    COVID-19 / SARS-CoV-2 preprints

    List of important preprints dealing with the ongoing coronavirus outbreak. See http://covidpreprints.com for additional resources and timeline, and https://connect.biorxiv.org/relate/content/181 for full list of bioRxiv and medRxiv preprints on this topic

     



    List by Gautam Dey, Zhang-He Goh

    1

    SDB 78th Annual Meeting 2019

    A curation of the preprints presented at the SDB meeting in Boston, July 26-30 2019. The preList will be updated throughout the duration of the meeting.

     



    List by Alex Eve

    Pattern formation during development

    The aim of this preList is to integrate results about the mechanisms that govern patterning during development, from genes implicated in the processes to theoritical models of pattern formation in nature.

     



    List by Alexa Sadier

    Also in the genetics category:

    TAGC 2020

    Preprints recently presented at the virtual Allied Genetics Conference, April 22-26, 2020. #TAGC20

     



    List by Maiko Kitaoka, Madhuja Samaddar, Miguel V. Almeida, Sejal Davla, Jennifer Ann Black, Gautam Dey

    ECFG15 – Fungal biology

    Preprints presented at 15th European Conference on Fungal Genetics 17-20 February 2020 Rome

     



    List by Hiral Shah

    Autophagy

    Preprints on autophagy and lysosomal degradation and its role in neurodegeneration and disease. Includes molecular mechanisms, upstream signalling and regulation as well as studies on pharmaceutical interventions to upregulate the process.

     



    List by Sandra Malmgren Hill

    Zebrafish immunology

    A compilation of cutting-edge research that uses the zebrafish as a model system to elucidate novel immunological mechanisms in health and disease.

     



    List by Shikha Nayar

    Also in the microbiology category:

    BioMalPar XVI: Biology and Pathology of the Malaria Parasite

    [under construction] Preprints presented at the (fully virtual) EMBL BioMalPar XVI, 17-18 May 2020 #emblmalaria

     



    List by Gautam Dey, Samantha Seah

    1

    ECFG15 – Fungal biology

    Preprints presented at 15th European Conference on Fungal Genetics 17-20 February 2020 Rome

     



    List by Hiral Shah

    EMBL Seeing is Believing – Imaging the Molecular Processes of Life

    Preprints discussed at the 2019 edition of Seeing is Believing, at EMBL Heidelberg from the 9th-12th October 2019

     



    List by Gautam Dey

    Antimicrobials: Discovery, clinical use, and development of resistance

    Preprints that describe the discovery of new antimicrobials and any improvements made regarding their clinical use. Includes preprints that detail the factors affecting antimicrobial selection and the development of antimicrobial resistance.

     



    List by Zhang-He Goh

    Also in the molecular biology category:

    ECFG15 – Fungal biology

    Preprints presented at 15th European Conference on Fungal Genetics 17-20 February 2020 Rome

     



    List by Hiral Shah

    ASCB EMBO Annual Meeting 2019

    A collection of preprints presented at the 2019 ASCB EMBO Meeting in Washington, DC (December 7-11)

     



    List by Madhuja Samaddar, Ramona Jühlen, Amanda Haage, Laura McCormick, Maiko Kitaoka

    Lung Disease and Regeneration

    This preprint list compiles highlights from the field of lung biology.

     



    List by Rob Hynds

    MitoList

    This list of preprints is focused on work expanding our knowledge on mitochondria in any organism, tissue or cell type, from the normal biology to the pathology.

     



    List by Sandra Franco Iborra

    Also in the pathology category:

    ECFG15 – Fungal biology

    Preprints presented at 15th European Conference on Fungal Genetics 17-20 February 2020 Rome

     



    List by Hiral Shah

    COVID-19 / SARS-CoV-2 preprints

    List of important preprints dealing with the ongoing coronavirus outbreak. See http://covidpreprints.com for additional resources and timeline, and https://connect.biorxiv.org/relate/content/181 for full list of bioRxiv and medRxiv preprints on this topic

     



    List by Gautam Dey, Zhang-He Goh

    1

    Cellular metabolism

    A curated list of preprints related to cellular metabolism at Biorxiv by Pablo Ranea Robles from the Prelights community. Special interest on lipid metabolism, peroxisomes and mitochondria.

     



    List by Pablo Ranea Robles

    Also in the cell biology category:

    Shoot and root thermomorphogenesis are linked by a developmental trade-off

    Christophe Gaillochet, Yogev Burko, Matthieu Pierre Platre, et al.



    Selected by Alvaro Montiel-Jorda

    A Method to sort heterogenous cell populations based on migration in 2D and 3D environments

    Aditya Arora, Jorge Luis Galeano Niño, Myint Zu Myaing, et al.



    Selected by Mariana De Niz

    1

    Trackosome: a computational toolbox to study the spatiotemporal dynamics of centrosomes, nuclear envelope and cellular membrane

    Domingos Castro, Vanessa Nunes, Joana T. Lima, et al.



    Selected by Mariana De Niz

    1

    Also in the evolutionary biology category:

    Metabolic scaling has diversified among species, despite an evolutionary constraint within species

    Julian E. Beaman, Daniel Ortiz-Barrientos, Keyne Monro, et al.



    Selected by Charlotte Nelson

    Two FtsZ proteins orchestrate archaeal cell division through distinct functions in ring assembly and constriction

    Yan Liao, Solenne Ithurbide, Jan Löwe, et al.



    Selected by Gautam Dey

    1

    LINE elements are a reservoir of regulatory potential in mammalian genomes

    Maša Roller, Ericca Stamper, Diego Villar, et al.



    Selected by Sergio Menchero

    1

    Also in the genetics category:

    Shoot and root thermomorphogenesis are linked by a developmental trade-off

    Christophe Gaillochet, Yogev Burko, Matthieu Pierre Platre, et al.



    Selected by Alvaro Montiel-Jorda

    Sexually Dimorphic DNA Damage Responses and Mutation Avoidance in the Mouse Germline

    Jordana C. Bloom, John C. Schimenti



    Selected by Jennifer Ann Black

    PINK1 and parkin shape the organism-wide distribution of a deleterious mitochondrial genome

    Arnaud Ahier, Nadia Cummins, Chuan-Yang Dai, et al.



    Selected by Andrea Irazoki

    1

    Also in the microbiology category:

    Preserved efficacy and reduced toxicity with intermittent linezolid dosing in combination with bedaquiline and pretomanid in a murine TB model

    Kristina M. Bigelow, Rokeya Tasneen, Yong S. Chang, et al.



    Selected by Zhang-He Goh

    Trophic cooperation promotes bacterial survival of Staphylococcus aureus and Pseudomonas aeruginosa

    Laura Camus, Paul Briaud, Sylvère Bastien, et al.



    Selected by Josie Gibson

    1

    Two FtsZ proteins orchestrate archaeal cell division through distinct functions in ring assembly and constriction

    Yan Liao, Solenne Ithurbide, Jan Löwe, et al.



    Selected by Gautam Dey

    1

    Also in the molecular biology category:

    Shoot and root thermomorphogenesis are linked by a developmental trade-off

    Christophe Gaillochet, Yogev Burko, Matthieu Pierre Platre, et al.



    Selected by Alvaro Montiel-Jorda

    Characterization of the Novel Mitochondrial Genome Segregation Factor TAP110 in Trypanosoma brucei

    Simona Amodeo, Ana Kalichava, Albert Fradera-Sola, et al.



    Selected by Jennifer Ann Black

    1

    Single-molecule live cell imaging of the Smc5/6 DNA repair complex

    Thomas J. Etheridge, Desiree Villahermosa, Anja Irmisch, et al.



    Selected by Jennifer Ann Black

    1

    Also in the pathology category:

    Single-cell longitudinal analysis of SARS-CoV-2 infection in human bronchial epithelial cells

    Neal G. Ravindra, Mia Madel Alfajaro, Victor Gasque, et al.



    Selected by Catherine Dabrowska

    MiR-146a controls age related bone loss

    Victoria Saferding, Melanie Hofmann, Julia S. Brunner, et al.



    Selected by Claire Simon & Sophie Morgani

    In situ structure determination of virus capsids imaged within cell nuclei by correlative light and cryo-electron tomography

    Swetha Vijayakrishnan, Marion McElwee, Colin Loney, et al.



    Selected by Debakshi Mullick

    1
    Close