ECFG15 – Fungal biology
Preprints presented at 15th European Conference on Fungal Genetics 17-20 February 2020 Rome
List by Hiral ShahPreprints:
A hierarchical transcriptional network controls appressorium-mediated plant infection by the rice blast fungus Magnaporthe oryzae
https://www.biorxiv.org/content/10.1101/2020.02.05.936203v1
MAP kinase Pmk1, and transcriptionn factors Hox7 and Mst12 establish a hierarchy of global regulators required for infection cell development in the rice blast fungus
More filtering on SNP calling does not remove evidence of inter-nucleus recombination in dikaryotic arbuscular mycorrhizal fungi
https://www.biorxiv.org/content/10.1101/2020.01.15.906412v1
Signatures of recombination detected in mycorrhizal fungus Rhizophagus despite stringent re-analysis
Multiplex genetic engineering exploiting pyrimidine salvage pathway-based self-encoded selectable markers
https://www.biorxiv.org/content/10.1101/2020.01.16.908764v2
New self-encoded selectable markers for genome integration in Aspergillus with no effects on growth and virulence
Natural diversity in the predatory behavior facilitates the establishment of a new robust model strain for nematode-trapping fungi
https://www.biorxiv.org/content/10.1101/843698v1
Wild isolates of carnivorous fungi of Arthrobotrys species vary in their ability to trap and kill worms. G protein signalling is key to the response.
Human neutrophils produce antifungal extracellular vesicles against Aspergillus fumigatus
https://www.biorxiv.org/content/10.1101/620294v2
Neutrophils release extracellular vesicles loaded with antifungals in response to Aspergilus fumigatus attack. The vesicles enter the fungal hyphae and interfere with fungal cell wall integrity. A new mechanism of human immune response against fungi.
Septins coordinate cell wall integrity and lipid metabolism in a sphingolipid-dependent process
https://www.biorxiv.org/content/10.1101/2020.02.09.940718v1
Sphingolipid metabolism regulates the assembly of cytoskeletal GTPases, septins, at sites of membrane and cell wall remodelling in Aspergillus nidulans.
Chromatin features define adaptive genomic regions in a fungal plant pathogen
https://www.biorxiv.org/content/10.1101/2020.01.27.921486v1
Methylation marks the lineage specific regions to create a hybrid chromatin state in the vascular wilt fungus Verticillium dahliae
Categories: cell biology , evolutionary biology , genetics , microbiology , molecular biology , pathology
Posted on: 21st February 2020
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EMBL Synthetic Morphogenesis: From Gene Circuits to Tissue Architecture (2021)
A list of preprints mentioned at the #EESmorphoG virtual meeting in 2021.
List by | Alex Eve |
FENS 2020
A collection of preprints presented during the virtual meeting of the Federation of European Neuroscience Societies (FENS) in 2020
List by | Ana Dorrego-Rivas |
Planar Cell Polarity – PCP
This preList contains preprints about the latest findings on Planar Cell Polarity (PCP) in various model organisms at the molecular, cellular and tissue levels.
List by | Ana Dorrego-Rivas |
BioMalPar XVI: Biology and Pathology of the Malaria Parasite
[under construction] Preprints presented at the (fully virtual) EMBL BioMalPar XVI, 17-18 May 2020 #emblmalaria
List by | Dey Lab, Samantha Seah |
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Cell Polarity
Recent research from the field of cell polarity is summarized in this list of preprints. It comprises of studies focusing on various forms of cell polarity ranging from epithelial polarity, planar cell polarity to front-to-rear polarity.
List by | Yamini Ravichandran |
TAGC 2020
Preprints recently presented at the virtual Allied Genetics Conference, April 22-26, 2020. #TAGC20
List by | Maiko Kitaoka, Madhuja Samaddar, Miguel V. Almeida, Sejal Davla, Jennifer Ann Black, Dey Lab |
3D Gastruloids
A curated list of preprints related to Gastruloids (in vitro models of early development obtained by 3D aggregation of embryonic cells). Preprint missing? Don't hesitate to let us know.
List by | Paul Gerald L. Sanchez and Stefano Vianello |
ASCB EMBO Annual Meeting 2019
A collection of preprints presented at the 2019 ASCB EMBO Meeting in Washington, DC (December 7-11)
List by | Madhuja Samaddar, Ramona Jühlen, Amanda Haage, Laura McCormick, Maiko Kitaoka |
EMBL Seeing is Believing – Imaging the Molecular Processes of Life
Preprints discussed at the 2019 edition of Seeing is Believing, at EMBL Heidelberg from the 9th-12th October 2019
List by | Dey Lab |
Autophagy
Preprints on autophagy and lysosomal degradation and its role in neurodegeneration and disease. Includes molecular mechanisms, upstream signalling and regulation as well as studies on pharmaceutical interventions to upregulate the process.
List by | Sandra Malmgren Hill |
Lung Disease and Regeneration
This preprint list compiles highlights from the field of lung biology.
List by | Rob Hynds |
Cellular metabolism
A curated list of preprints related to cellular metabolism at Biorxiv by Pablo Ranea Robles from the Prelights community. Special interest on lipid metabolism, peroxisomes and mitochondria.
List by | Pablo Ranea Robles |
BSCB/BSDB Annual Meeting 2019
Preprints presented at the BSCB/BSDB Annual Meeting 2019
List by | Dey Lab |
MitoList
This list of preprints is focused on work expanding our knowledge on mitochondria in any organism, tissue or cell type, from the normal biology to the pathology.
List by | Sandra Franco Iborra |
Biophysical Society Annual Meeting 2019
Few of the preprints that were discussed in the recent BPS annual meeting at Baltimore, USA
List by | Joseph Jose Thottacherry |
ASCB/EMBO Annual Meeting 2018
This list relates to preprints that were discussed at the recent ASCB conference.
List by | Dey Lab, Amanda Haage |
Also in the evolutionary biology category:
EMBL Synthetic Morphogenesis: From Gene Circuits to Tissue Architecture (2021)
A list of preprints mentioned at the #EESmorphoG virtual meeting in 2021.
List by | Alex Eve |
Planar Cell Polarity – PCP
This preList contains preprints about the latest findings on Planar Cell Polarity (PCP) in various model organisms at the molecular, cellular and tissue levels.
List by | Ana Dorrego-Rivas |
TAGC 2020
Preprints recently presented at the virtual Allied Genetics Conference, April 22-26, 2020. #TAGC20
List by | Maiko Kitaoka, Madhuja Samaddar, Miguel V. Almeida, Sejal Davla, Jennifer Ann Black, Dey Lab |
ECFG15 – Fungal biology
Preprints presented at 15th European Conference on Fungal Genetics 17-20 February 2020 Rome
List by | Hiral Shah |
COVID-19 / SARS-CoV-2 preprints
List of important preprints dealing with the ongoing coronavirus outbreak. See http://covidpreprints.com for additional resources and timeline, and https://connect.biorxiv.org/relate/content/181 for full list of bioRxiv and medRxiv preprints on this topic
List by | Dey Lab, Zhang-He Goh |
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SDB 78th Annual Meeting 2019
A curation of the preprints presented at the SDB meeting in Boston, July 26-30 2019. The preList will be updated throughout the duration of the meeting.
List by | Alex Eve |
Pattern formation during development
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List by | Alexa Sadier |
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EMBL Conference: From functional genomics to systems biology
Preprints presented at the virtual EMBL conference "from functional genomics and systems biology", 16-19 November 2020
List by | Jesus Victorino |
TAGC 2020
Preprints recently presented at the virtual Allied Genetics Conference, April 22-26, 2020. #TAGC20
List by | Maiko Kitaoka, Madhuja Samaddar, Miguel V. Almeida, Sejal Davla, Jennifer Ann Black, Dey Lab |
ECFG15 – Fungal biology
Preprints presented at 15th European Conference on Fungal Genetics 17-20 February 2020 Rome
List by | Hiral Shah |
Autophagy
Preprints on autophagy and lysosomal degradation and its role in neurodegeneration and disease. Includes molecular mechanisms, upstream signalling and regulation as well as studies on pharmaceutical interventions to upregulate the process.
List by | Sandra Malmgren Hill |
Zebrafish immunology
A compilation of cutting-edge research that uses the zebrafish as a model system to elucidate novel immunological mechanisms in health and disease.
List by | Shikha Nayar |
Also in the microbiology category:
BioMalPar XVI: Biology and Pathology of the Malaria Parasite
[under construction] Preprints presented at the (fully virtual) EMBL BioMalPar XVI, 17-18 May 2020 #emblmalaria
List by | Dey Lab, Samantha Seah |
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ECFG15 – Fungal biology
Preprints presented at 15th European Conference on Fungal Genetics 17-20 February 2020 Rome
List by | Hiral Shah |
EMBL Seeing is Believing – Imaging the Molecular Processes of Life
Preprints discussed at the 2019 edition of Seeing is Believing, at EMBL Heidelberg from the 9th-12th October 2019
List by | Dey Lab |
Antimicrobials: Discovery, clinical use, and development of resistance
Preprints that describe the discovery of new antimicrobials and any improvements made regarding their clinical use. Includes preprints that detail the factors affecting antimicrobial selection and the development of antimicrobial resistance.
List by | Zhang-He Goh |
Also in the molecular biology category:
EMBL Synthetic Morphogenesis: From Gene Circuits to Tissue Architecture (2021)
A list of preprints mentioned at the #EESmorphoG virtual meeting in 2021.
List by | Alex Eve |
FENS 2020
A collection of preprints presented during the virtual meeting of the Federation of European Neuroscience Societies (FENS) in 2020
List by | Ana Dorrego-Rivas |
ECFG15 – Fungal biology
Preprints presented at 15th European Conference on Fungal Genetics 17-20 February 2020 Rome
List by | Hiral Shah |
ASCB EMBO Annual Meeting 2019
A collection of preprints presented at the 2019 ASCB EMBO Meeting in Washington, DC (December 7-11)
List by | Madhuja Samaddar, Ramona Jühlen, Amanda Haage, Laura McCormick, Maiko Kitaoka |
Lung Disease and Regeneration
This preprint list compiles highlights from the field of lung biology.
List by | Rob Hynds |
MitoList
This list of preprints is focused on work expanding our knowledge on mitochondria in any organism, tissue or cell type, from the normal biology to the pathology.
List by | Sandra Franco Iborra |
Also in the pathology category:
ECFG15 – Fungal biology
Preprints presented at 15th European Conference on Fungal Genetics 17-20 February 2020 Rome
List by | Hiral Shah |
COVID-19 / SARS-CoV-2 preprints
List of important preprints dealing with the ongoing coronavirus outbreak. See http://covidpreprints.com for additional resources and timeline, and https://connect.biorxiv.org/relate/content/181 for full list of bioRxiv and medRxiv preprints on this topic
List by | Dey Lab, Zhang-He Goh |
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Cellular metabolism
A curated list of preprints related to cellular metabolism at Biorxiv by Pablo Ranea Robles from the Prelights community. Special interest on lipid metabolism, peroxisomes and mitochondria.
List by | Pablo Ranea Robles |
Also in the cell biology category:
Lactate Accelerates Mouse ES Cell Differentiation Towards the XEN Lineage
Selected by | Nozomu Takata |
H3 acetylation selectively promotes basal progenitor proliferation and neocortex expansion by activating TRNP1 expression
Selected by | Ana Uzquiano |
Clathrin adaptors mediate two sequential pathways of intra-Golgi recycling
Selected by | Jennifer Ann Black |
1
Also in the evolutionary biology category:
Development of the foregut in Katharina tunicata (Mollusca; Polyplacophora)
Selected by | Paul Gerald L. Sanchez and Stefano Vianello |
Antiviral activity of bacterial TIR domains via signaling molecules that trigger cell death
Selected by | Jonny Coates, Connor Rosen |
A developmentally programmed splicing failure attenuates the DNA damage response during mammalian zygotic genome activation
Selected by | Ram |
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Also in the genetics category:
Ciliary control of meiotic chromosomal pairing mechanics and germ cell morphogenesis
Selected by | Robert Mahen |
1
Fetal estrogens are not involved in sex determination but critical for early ovarian differentiation in rabbits
Selected by | Nándor Lipták |
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Dissecting Mammalian Spermatogenesis Using Spatial Transcriptomics
Selected by | Martin Estermann |
Also in the microbiology category:
Also in the molecular biology category:
Lactate Accelerates Mouse ES Cell Differentiation Towards the XEN Lineage
Selected by | Nozomu Takata |
Brain deletion of Serf2 shifts amyloid conformation in a mouse model
Selected by | Utrecht Protein Folding and Assembly |
A systematic analysis of Trypanosoma brucei chromatin factors identifies novel protein interaction networks associated with sites of transcription initiation and termination
Selected by | Tamara Sternlieb |
Also in the pathology category:
Bacteriological and histopathological findings in cetaceans that stranded in the Philippines from 2017 to 2018
Selected by | Paul Gerald L. Sanchez and Stefano Vianello |
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Adaptive cell invasion maintains organ homeostasis
Selected by | Mariana De Niz |
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Endothelial cell invasiveness is controlled by myosin IIA-dependent inhibition of Arp2/3 activity
Selected by | Mariana De Niz |
1