Close

The roles of NADPH oxidases during adult zebrafish fin regeneration

Kunal Chopra, Milda Folkmanaitė, Liam Stockdale, Vishali Shathish, Shoko Ishibashi, Rachel Bergin, Jorge Amich, Enrique Amaya

Preprint posted on 14 July 2021 https://www.biorxiv.org/content/10.1101/2021.07.13.452203v1

Article now published in iScience at http://dx.doi.org/10.1016/j.isci.2023.106147

Don’t “NOX” it ‘til you’ve tried it: the importance of NADPH oxidases during fin regeneration.

Selected by Julia Grzymkowski

Background

            Reactive oxygen species (ROS) have been shown to be important signaling molecules during regeneration in a multitude of species. In addition to their role in immune cell recruitment to fight off possible wound site infection (1), ROS are required for the activation of cell proliferation pathways needed for wound healing and tissue outgrowth (2). Non-specific inhibition of NADPH oxidases (NOXes), which are prominent producers of ROS, is the most common method to study the role of ROS during regeneration (3), but little is known about which specific NOX(es) or NOX subunit(s) are the main contributors of ROS production during regeneration. In this preprint, the authors aim to identify the molecular mechanisms of ROS production during regeneration, which may lead to the generation of therapeutic strategies to induce a regenerative response in tissues otherwise lacking regenerative ability.

Figure 1: Methodology and key findings. A) Amputated fins regenerate in four weeks, three weeks post amputation (3wpa) shown for consistency with (C). Methodology for quantification of rate of adult fin regeneration shown under images. B) duox mutants and duox/cyba double mutants show the most significant decrease in regeneration rate compared to controls. C) duox mutants show significantly lower levels of ROS at amputation site. D) Post-amputation ROS levels oscillate with a circadian rhythm. (Adapted from Figs 2, 3, and 5, Chopra et al. 2021)

Key Findings         

            Using CRISPR-Cas9 gene editing technology, Chopra and colleagues generated homozygous mutant zebrafish lines for cyba, the gene that encodes the P22phox subunit of NOXes 1-4, and for nox5, which encodes the calcium-regulated single subunit NOX enzyme Nox5. In addition, they obtained nonsense mutant allele lines for cyba and duox (another NOX) from the Zebrafish Mutation Project.

First, the authors wanted to assess whether any of the mutants displayed interesting phenotypes. In a previous study, they found that duox mutants had phenotypes consistent with hypothyroidism, such as shorter body length and external goiters (4). Mutations in human CYBA have been linked to chronic granulomatous disease (CGD), where patients experience recurrent bacterial and/or fungal infections due to insufficient ROS production by immune cells, which kill invading pathogens. Interestingly, in this study, the authors found that cyba mutant zebrafish exhibited higher mortality from Aspergillus fumigatus infection, providing evidence for the susceptibility of these lines to fungal infection, and their usefulness as models for human CGD. While no obvious phenotypes were present in nox5 mutants, the authors made the interesting discovery that nox5 mutants show prolonged resistance to anesthesia. Remarkably, there was little phenotypic overlap between the different mutants, highlighting the specific utilization of these NOXes/NOX subunits by diverse biological pathways.

By assessing the regenerative ability of the caudal fin in these mutants, the authors wanted to investigate which NOX or NOX subunit is responsible for ROS production during the process of regeneration. Before moving forward, the authors determined the appropriate age-range of mutants to use in their experiments to limit age biases, since regenerative capacity is known to change over time (5). Based on the results, the authors decided to use six to eight months-old fish for their study. Regeneration rate was determined by calculating the size of the amputated caudal fin each week (zero to four weeks post amputation) and converting that to a percentage of the original fin size (Fig 1A).

When assessing caudal fin regeneration in mutant fish, only the duox nonsense mutant and the duox/cyba double mutants displayed a significantly delayed rate of regeneration, resulting in stunted regeneration over the entire four-weeks (Fig 1B). As mentioned above, the duox mutants displayed phenotypes consistent with hypothyroidism, leading the authors to examine if the reduced regeneration rate in these mutants could be attributed to hypothyroidism. By comparing manet mutant fish, containing a nonsense mutation within the gene coding for the thyroid stimulating hormone receptor (4), with duox mutants, they noted a reduction of the regeneration rate occurred at different times during the four weeks. Thus, they concluded that the effect of duox on regeneration was not solely caused by hypothyroidism.

Baseline ROS levels before and after amputation were assessed using WT animals on a ubb:HyPer background, where HyPer is an oxidative sensitive reporter fluorophore used to measure H2O2 level in vivo (6). ROS levels rose significantly after amputation, were highest in the morning and lowest in the afternoon and were sustained for two weeks post amputation. Interestingly, the authors found that ROS levels oscillated with a circadian rhythm (Fig 1D).

Finally, the authors asked whether post-amputation ROS levels were affected in the nox mutants. Cyba mutant animals showed increased ROS post-amputation. These increased levels returned to baseline after one week, quicker than in the controls, and overall ROS levels were lower in this mutant. Duox mutant zebrafish showed consistently lower ROS levels post-amputation, even lower than WT unamputated controls, and nox5 mutants showed increased ROS post-amputation, but levels quickly returned to baseline (Fig 1C). As the duox mutants displayed the most significant effects on tail regeneration and post-amputation ROS production, overall, these data support Duox as being the major NADPH oxidase responsible for ROS production during regeneration.

Why I like this preprint

The importance of metabolic and redox homeostasis during development and regeneration has only recently begun to be appreciated and studied. By using a genetic approach, the authors uncovered duox as the main contributor of ROS during regeneration, a discovery which would not have been possible with the continued use of non-specific NADPH oxidase inhibitors. Moreover, the authors’ finding that post-amputation ROS levels oscillate with a circadian rhythm was completely unexpected and exciting. Future research from this group could further explore this phenomenon and hopefully answer the questions posed in the discussion.

Questions for the authors

  1. Did the authors generate multiple double mutant animals? Did any of them display interesting phenotypes?
  2. Could the amputated tails of duox or duox/cyba mutants ever reach the size of the original if given more time (past 4 weeks), or was the tail always stunted?
  3. While mutations in duox affected regeneration more strongly than mutations in tshr, manet mutants still had decreased rates of regeneration. Do the authors plan to further study the effects of hypothyroidism on regeneration?
  4. In the discussion, it was posited that a reason for the stronger effect on regeneration of the double mutant was the lower levels of ROS seen in each individual mutant. Is it possible to assess ROS levels in the double mutant using the reporter line or using some other ROS indicator?

References

  1. Yoo S.K., Starnes T.W., Deng Q., Huttenlocher A. 2011. Lyn is a redox sensor that mediates leukocyte wound attraction in vivo. Nature. 480:109–112. https://doi.org/10.1038/nature10632
  2. Baddar, N. W. A. H., Chithrala, A. and Voss, S. R. (2019). Amputation-induced reactive oxygen species signaling is required for axolotl tail regeneration. Dev Dynam 248, 189–196.
  3. Gauron, C., Rampon, C., Bouzaffour, M., Ipendey, E., Teillon, J., Volovitch, M. and Vriz, S. (2013). Sustained production of ROS triggers compensatory proliferation and is required for regeneration to proceed. Sci Rep 3, 2084.
  4. Chopra, K., Ishibashi, S. and Amaya, E. (2019). Zebrafish duox mutations provide a model for human congenital hypothyroidism. Biol Open 8, bio.037655.
  5. Yun MH. Changes in Regenerative Capacity through Lifespan. Int J Mol Sci. 2015;16(10):25392-25432. doi:10.3390/ijms161025392
  6. Love, N. R., Chen, Y., Ishibashi, S., Kritsiligkou, P., Lea, R., Koh, Y., Gallop, J. L., Dorey, K. and Amaya, E. (2013). Amputation-induced reactive oxygen species are required for successful Xenopus tadpole tail regeneration. Nat Cell Biol 15, 222–228.

Tags: fish

Posted on: 6 August 2021

doi: https://doi.org/10.1242/prelights.30240

Read preprint (No Ratings Yet)

Have your say

Your email address will not be published. Required fields are marked *

This site uses Akismet to reduce spam. Learn how your comment data is processed.

Sign up to customise the site to your preferences and to receive alerts

Register here

preLists in the developmental biology category:

BSDB/GenSoc Spring Meeting 2024

A list of preprints highlighted at the British Society for Developmental Biology and Genetics Society joint Spring meeting 2024 at Warwick, UK.

 



List by Joyce Yu, Katherine Brown

GfE/ DSDB meeting 2024

This preList highlights the preprints discussed at the 2024 joint German and Dutch developmental biology societies meeting that took place in March 2024 in Osnabrück, Germany.

 



List by Joyce Yu

‘In preprints’ from Development 2022-2023

A list of the preprints featured in Development's 'In preprints' articles between 2022-2023

 



List by Alex Eve, Katherine Brown

preLights peer support – preprints of interest

This is a preprint repository to organise the preprints and preLights covered through the 'preLights peer support' initiative.

 



List by preLights peer support

The Society for Developmental Biology 82nd Annual Meeting

This preList is made up of the preprints discussed during the Society for Developmental Biology 82nd Annual Meeting that took place in Chicago in July 2023.

 



List by Joyce Yu, Katherine Brown

CSHL 87th Symposium: Stem Cells

Preprints mentioned by speakers at the #CSHLsymp23

 



List by Alex Eve

Journal of Cell Science meeting ‘Imaging Cell Dynamics’

This preList highlights the preprints discussed at the JCS meeting 'Imaging Cell Dynamics'. The meeting was held from 14 - 17 May 2023 in Lisbon, Portugal and was organised by Erika Holzbaur, Jennifer Lippincott-Schwartz, Rob Parton and Michael Way.

 



List by Helen Zenner

9th International Symposium on the Biology of Vertebrate Sex Determination

This preList contains preprints discussed during the 9th International Symposium on the Biology of Vertebrate Sex Determination. This conference was held in Kona, Hawaii from April 17th to 21st 2023.

 



List by Martin Estermann

Alumni picks – preLights 5th Birthday

This preList contains preprints that were picked and highlighted by preLights Alumni - an initiative that was set up to mark preLights 5th birthday. More entries will follow throughout February and March 2023.

 



List by Sergio Menchero et al.

CellBio 2022 – An ASCB/EMBO Meeting

This preLists features preprints that were discussed and presented during the CellBio 2022 meeting in Washington, DC in December 2022.

 



List by Nadja Hümpfer et al.

2nd Conference of the Visegrád Group Society for Developmental Biology

Preprints from the 2nd Conference of the Visegrád Group Society for Developmental Biology (2-5 September, 2021, Szeged, Hungary)

 



List by Nándor Lipták

Fibroblasts

The advances in fibroblast biology preList explores the recent discoveries and preprints of the fibroblast world. Get ready to immerse yourself with this list created for fibroblasts aficionados and lovers, and beyond. Here, my goal is to include preprints of fibroblast biology, heterogeneity, fate, extracellular matrix, behavior, topography, single-cell atlases, spatial transcriptomics, and their matrix!

 



List by Osvaldo Contreras

EMBL Synthetic Morphogenesis: From Gene Circuits to Tissue Architecture (2021)

A list of preprints mentioned at the #EESmorphoG virtual meeting in 2021.

 



List by Alex Eve

EMBL Conference: From functional genomics to systems biology

Preprints presented at the virtual EMBL conference "from functional genomics and systems biology", 16-19 November 2020

 



List by Jesus Victorino

Single Cell Biology 2020

A list of preprints mentioned at the Wellcome Genome Campus Single Cell Biology 2020 meeting.

 



List by Alex Eve

Society for Developmental Biology 79th Annual Meeting

Preprints at SDB 2020

 



List by Irepan Salvador-Martinez, Martin Estermann

FENS 2020

A collection of preprints presented during the virtual meeting of the Federation of European Neuroscience Societies (FENS) in 2020

 



List by Ana Dorrego-Rivas

Planar Cell Polarity – PCP

This preList contains preprints about the latest findings on Planar Cell Polarity (PCP) in various model organisms at the molecular, cellular and tissue levels.

 



List by Ana Dorrego-Rivas

Cell Polarity

Recent research from the field of cell polarity is summarized in this list of preprints. It comprises of studies focusing on various forms of cell polarity ranging from epithelial polarity, planar cell polarity to front-to-rear polarity.

 



List by Yamini Ravichandran

TAGC 2020

Preprints recently presented at the virtual Allied Genetics Conference, April 22-26, 2020. #TAGC20

 



List by Maiko Kitaoka et al.

3D Gastruloids

A curated list of preprints related to Gastruloids (in vitro models of early development obtained by 3D aggregation of embryonic cells). Updated until July 2021.

 



List by Paul Gerald L. Sanchez and Stefano Vianello

ASCB EMBO Annual Meeting 2019

A collection of preprints presented at the 2019 ASCB EMBO Meeting in Washington, DC (December 7-11)

 



List by Madhuja Samaddar et al.

EDBC Alicante 2019

Preprints presented at the European Developmental Biology Congress (EDBC) in Alicante, October 23-26 2019.

 



List by Sergio Menchero et al.

EMBL Seeing is Believing – Imaging the Molecular Processes of Life

Preprints discussed at the 2019 edition of Seeing is Believing, at EMBL Heidelberg from the 9th-12th October 2019

 



List by Dey Lab

SDB 78th Annual Meeting 2019

A curation of the preprints presented at the SDB meeting in Boston, July 26-30 2019. The preList will be updated throughout the duration of the meeting.

 



List by Alex Eve

Lung Disease and Regeneration

This preprint list compiles highlights from the field of lung biology.

 



List by Rob Hynds

Young Embryologist Network Conference 2019

Preprints presented at the Young Embryologist Network 2019 conference, 13 May, The Francis Crick Institute, London

 



List by Alex Eve

Pattern formation during development

The aim of this preList is to integrate results about the mechanisms that govern patterning during development, from genes implicated in the processes to theoritical models of pattern formation in nature.

 



List by Alexa Sadier

BSCB/BSDB Annual Meeting 2019

Preprints presented at the BSCB/BSDB Annual Meeting 2019

 



List by Dey Lab

Zebrafish immunology

A compilation of cutting-edge research that uses the zebrafish as a model system to elucidate novel immunological mechanisms in health and disease.

 



List by Shikha Nayar

Also in the genetics category:

BSDB/GenSoc Spring Meeting 2024

A list of preprints highlighted at the British Society for Developmental Biology and Genetics Society joint Spring meeting 2024 at Warwick, UK.

 



List by Joyce Yu, Katherine Brown

BSCB-Biochemical Society 2024 Cell Migration meeting

This preList features preprints that were discussed and presented during the BSCB-Biochemical Society 2024 Cell Migration meeting in Birmingham, UK in April 2024. Kindly put together by Sara Morais da Silva, Reviews Editor at Journal of Cell Science.

 



List by Reinier Prosee

9th International Symposium on the Biology of Vertebrate Sex Determination

This preList contains preprints discussed during the 9th International Symposium on the Biology of Vertebrate Sex Determination. This conference was held in Kona, Hawaii from April 17th to 21st 2023.

 



List by Martin Estermann

Alumni picks – preLights 5th Birthday

This preList contains preprints that were picked and highlighted by preLights Alumni - an initiative that was set up to mark preLights 5th birthday. More entries will follow throughout February and March 2023.

 



List by Sergio Menchero et al.

Semmelweis Symposium 2022: 40th anniversary of international medical education at Semmelweis University

This preList contains preprints discussed during the 'Semmelweis Symposium 2022' (7-9 November), organised around the 40th anniversary of international medical education at Semmelweis University covering a wide range of topics.

 



List by Nándor Lipták

20th “Genetics Workshops in Hungary”, Szeged (25th, September)

In this annual conference, Hungarian geneticists, biochemists and biotechnologists presented their works. Link: http://group.szbk.u-szeged.hu/minikonf/archive/prg2021.pdf

 



List by Nándor Lipták

2nd Conference of the Visegrád Group Society for Developmental Biology

Preprints from the 2nd Conference of the Visegrád Group Society for Developmental Biology (2-5 September, 2021, Szeged, Hungary)

 



List by Nándor Lipták

EMBL Conference: From functional genomics to systems biology

Preprints presented at the virtual EMBL conference "from functional genomics and systems biology", 16-19 November 2020

 



List by Jesus Victorino

TAGC 2020

Preprints recently presented at the virtual Allied Genetics Conference, April 22-26, 2020. #TAGC20

 



List by Maiko Kitaoka et al.

ECFG15 – Fungal biology

Preprints presented at 15th European Conference on Fungal Genetics 17-20 February 2020 Rome

 



List by Hiral Shah

Autophagy

Preprints on autophagy and lysosomal degradation and its role in neurodegeneration and disease. Includes molecular mechanisms, upstream signalling and regulation as well as studies on pharmaceutical interventions to upregulate the process.

 



List by Sandra Malmgren Hill
Close