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Biologists @ 100 conference preList

This preList aims to capture all preprints being discussed at the Biologists @100 conference in Liverpool, UK, either as part of the poster sessions or the (flash/short/full-length) talks.

List by Jonathan Townson

Preprints:

Cell division and proliferation

Atypical Protein Kinase C Promotes its own Asymmetric Localisation by Phosphorylating Cdc42 in the C. elegans zygote

John Packer, Alicia G. Gubieda, Aaron Brooks, Lars N. Deutz, Iolo Squires, Shona Ellison, Claudia Schneider, Sundar Ram Naganathan, Adam J.M. Wollman, Daniel J. Dickinson, Josana Rodriguez

https://www.biorxiv.org/content/10.1101/2023.10.27.563985v2

The Chromosome Periphery is an Essential Compartment of Oocyte Chromosomes

Eva L Simpson, Ben Wetherall, Aleksandra Byrska, Liam P Cheeseman, Tania Mendonca, Xiaomeng Xing, Alison J Beckett, Helder Maiato, Alexandra Sarginson, Ian A Prior, Geraldine M Hartshorne, Andrew D McAinsh, Suzanne Madgwick, Daniel G. Booth

https://www.biorxiv.org/content/10.1101/2024.12.20.629576v1

Cell migration and communication

Fast label-free live imaging reveals key roles of flow dynamics and CD44-HA interaction in cancer cell arrest on endothelial monolayers

Gautier Follain, Sujan Ghimire, Joanna W. Pylvänäinen, Monika Vaitkevičiūtė, Diana Wurzinger, Camilo Guzmán, James RW Conway, Michal Dibus, Sanna Oikari, Kirsi Rilla, Marko Salmi, Johanna Ivaska, Guillaume Jacquemet

https://www.biorxiv.org/content/10.1101/2024.09.30.615654v1

Donor embryonic stem cells impede host epiblast specification in 8-cell stage chimeras by crowding and FGF4 signalling

Stanley E. Strawbridge, Anna Katharina Schrattel, Peter Humphreys, Ken A. Jones, Jérôme Artus, Anna-Katerina Hadjantonakis, Alexander Fletcher, Jennifer Nichols

https://www.biorxiv.org/content/10.1101/2024.11.08.622647v1

Single-cell phenomics reveals behavioural and mechanical heterogeneities underpinning collective migration during mouse anterior patterning

Matthew Stower, Felix Zhou, Holly Hathrell, Jason Yeung, Shifaan Thowfeequ, Jonathan Godwin, Falk Schneider, Christoffer Lagerholm, Marco Fritzsche, Jeyan Thiyagalingam, Xin Lu, Jens Rittscher, Shankar Srinivas

https://www.biorxiv.org/content/10.1101/2023.03.31.534937v1

Cellular and developmental basis of disease

Convergent evolution of somatic escape variants in SERPINA1 in the liver in alpha-1 anti-trypsin deficiency

Natalia Brzozowska, Lily YD Wu, Vera Khodzhaeva, William J Griffiths, Adam Duckworth, Hyunchul Jung, Tim H H Coorens, Yvette Hooks, Joseph E Chambers, Peter J Campbell, Stefan J Marciniak, Matthew Hoare

https://www.biorxiv.org/content/10.1101/2024.09.02.610686v1

Human spermatogenesis leads to a reduced nuclear pore structure and function

Ália dos Santos, Oliver Knowles, Tom Dendooven, Thomas Hale, Victoria L Hale, Alister Burt, Piotr Kolata, Giuseppe Cannone, Dom Bellini, David Barford, Matteo Allegretti

https://www.biorxiv.org/content/10.1101/2024.10.30.620797v2

Nucleophosmin mutations lead to abnormal, but reversible, nucleoli architecture and aggregate formation – Implications for NPM1-targeting therapies in AML

Martin Grundy, Kellie Lucken, Xiaomeng Xing, Eva L. Simpson, Ahmed Bayyoomi, Alison J. Beckett, Ian A. Prior, Daniel G. Booth, Claire H. Seedhouse

https://www.biorxiv.org/content/10.1101/2024.12.30.630786v1

Tracking exocytic vesicle movements reveals the spatial control of secretion in epithelial cells

Jennifer H. Richens, Mariia Dmitrieva, Helen L. Zenner, Nadine Muschalik, Richard Butler, Jade Glashauser, Carolina Camelo, Stefan Luschnig, Sean Munro, Jens Rittscher, Daniel St Johnston

https://www.biorxiv.org/content/10.1101/2024.01.25.577201v2

Conceptual frontiers

NGN3 oscillatory expression controls the timing of human pancreatic endocrine differentiation

Anzy Miller, Veronica Biga, Andrew Rowntree, Mariya Chhatriwala, Florence Woods, Elli Marinopoulou, Anoushka Kamath, Ludovic Vallier, Nancy Papalopulu

https://www.biorxiv.org/content/10.1101/2024.01.10.574974v1

Interdisciplinary approaches to combatting AMR

Mechanobiology

Cell shape noise strength regulates the rate of shape change during EMT-associated cell spreading

Wolfram Pönisch, Iskra Yanakieva, Guillaume Salbreux, Ewa K. Paluch

https://www.biorxiv.org/content/10.1101/2024.10.14.618199v2

Caging of membrane-to-cortex attachment proteins can trigger cellular symmetry breaking

Srishti Dar, Rubén Tesoro Moreno, Ivan Palaia, Anusha B. Gopalan, Zachary Gao Sun, Léanne Strauss, Richard R. Sprenger, Julio M. Belmonte, Sarah K. Foster, Michael Murrell, Christer S. Ejsing, Anđela Šarić, Maria Leptin, Alba Diz-Muñoz

https://www.biorxiv.org/content/10.1101/2024.10.14.618153v1

Local optogenetic NMYII activation within the zebrafish neural rod results in long-range, asymmetric force propagation

Helena A Crellin, Chengxi Zhu, Guillermo Serrano-Nájera, Amelia Race, Kevin O’Holleran, Martin O Lenz, Clare E Buckley

https://www.biorxiv.org/content/10.1101/2024.09.19.613826v4

Actomyosin Contractility is a Potent Suppressor of Mesoderm Induction by Human Pluripotent Stem Cells

Loic Fort, Wenjun Wang, Ian Macara

https://www.biorxiv.org/content/10.1101/2024.09.30.615859v2

Cardiomyocyte mechanical memory is regulated through the talin interactome and DLC1 dependent regulation of RhoA

Emilie Marhuenda, Ioannis Xanthis, Pragati Pandey, Amar Azad, Megan Richter, Davor Pavolvic, Katja Gehmlich, Giuseppe Faggian, Elisabeth Ehler, James Levitt, Simon Ameer-Beg, Thomas Iskratsch

https://www.biorxiv.org/content/10.1101/2023.07.19.549635v2

The Mitotic Chromosome Periphery: A Fluid Coat That Mediates Chromosome Mechanics

Tania Mendonca, Roman Urban, Kellie Lucken, George Coney, Manlio Tassieri, Neil M. Kad, Amanda J. Wright, Daniel G. Booth

https://www.biorxiv.org/content/10.1101/2024.12.21.628209v1

Mitotic spindle orientation and dynamics are fine-tuned by anisotropic tissue stretch via NuMA localisation

Nawseen Tarannum, Dionn Hargreaves, Dessislava Ilieva, Georgina K. Goddard, Oliver E. Jensen, Sarah Woolner

https://www.biorxiv.org/content/10.1101/2024.10.17.617436v2

Organelle dynamics

Patterning and morphogenesis

Single cell resolution 3D imaging and segmentation within intact live tissues

Giulia Paci, Pablo Vicente Munuera, Ines Fernandez Mosquera, A. Miranda, K. Lau, Q. Zhang, Ricardo Barrientos, Yanlan Mao

https://arxiv.org/abs/2501.19203

Bmper is required for morphogenesis of the anterior and posterior semicircular canal ducts in the developing zebrafish inner ear

Sarah Baxendale, Esther C. Maier, Nikolaus D. Obholzer, Sarah Burbridge, Joseph Zinski, Francesca B. Tuazon, Nicholas J. van Hateren, M. Montserrat Garcia Romero, Mar Marzo, Kazutomo Yokoya, Robert D. Knight, Sean G. Megason, Mary C. Mullins, Tanya T. Whitfield

https://www.biorxiv.org/content/10.1101/2021.06.27.450014v1

High-throughput three-dimensional characterization of morphogenetic signals during the formation of the vertebrate retina

Mario Ledesma-Terrón, Diego Pérez-Dones, Diego Mazó-Durán, David G. Míguez

https://www.biorxiv.org/content/10.1101/2024.04.09.588672v1

Dynamic Wt1 expression in the gastrulation-stage mouse embryo specifies vascular and visceral smooth muscle cell fate independently from mesothelial fate

Suad H. Alsukari, Huei Teng Ng, Lilly Lang, Sharna Lunn, Shanthi Beglinger, Lauren Carr, Michael Boyes, David A. Turner, Bettina Wilm

https://www.biorxiv.org/content/10.1101/2024.08.08.607207v2

Resolving forebrain developmental organisation by analysis of differential growth patterns

Elizabeth Manning, Kavitha Chinnaiya, Caitlyn Furley, Dong Won Kim, Seth Blackshaw, Marysia Placzek, Elsie Place

https://www.biorxiv.org/content/10.1101/2025.01.10.632351v1

An evolutionarily conserved role for VEGF signaling in the expansion of non-vascular tissue during regeneration

Aaron M. Savage, Alexandra C. Wagner, Ryan T. Kim, Paul Gilbert, Hani D. Singer, Erica Chen, Elane M. Kim, Noah Lopez, Kelly E. Dooling, Julia C. Paoli, S.Y. Celeste Wu, Sebastian Bohm, Rachna Chilambi, Tim Froitzheim, Steven J. Blair, Connor Powell, Adnan Abouelela, Anna G. Luong, Kara N. Thornton, Benjamin Tajer, Duygu Payzin-Dogru, Jessica L. Whited

https://www.biorxiv.org/content/10.1101/2024.10.01.616057v1

An improved Erk biosensor reveals oscillatory Erk dynamics driven by mitotic erasure during early development

Scott G. Wilcockson, Luca Guglielmi, Pablo Araguas Rodriguez, Marc Amoyel, Caroline S. Hill

https://www.biorxiv.org/content/10.1101/2022.11.03.515001v1

The molecular basis for functional divergence of duplicated SOX factors controlling endoderm formation and left-right patterning in zebrafish

Simaran Johal, Randa Elsayed, Kristen A. Panfilio, Andrew C. Nelson

https://www.biorxiv.org/content/10.1101/2024.02.06.579092v3

An avidity-driven mechanism of extracellular BMP regulation by Twisted gastrulation

Gareth Moore, Raluca Revici, Lauren Forbes Beadle, Holly Birchenough, Clair Baldock, Hilary L Ashe

https://www.biorxiv.org/content/10.1101/2024.07.08.602551v2

Sensory perception in a changing world

Surviving in the mountains: Temperature and elevation have contrasting physiological effects on the hoverfly Eristalis tenax in the Himalayas

Gauri Gharpure, Jagath Vedamurthy, Sakshi Priya, Geetha G Thimmegowda, Shannon B. Olsson

https://www.biorxiv.org/content/10.1101/2024.12.14.628473v1

Emerging Technologies

Squid: Simplifying Quantitative Imaging Platform Development and Deployment

Hongquan Li, Deepak Krishnamurthy, Ethan Li, Pranav Vyas, Nibha Akireddy, Chew Chai, Manu Prakash

https://www.biorxiv.org/content/10.1101/2020.12.28.424613v1

Lysosomal release of amino acids at ER three-way junctions regulates transmembrane and secretory protein mRNA translation

Heejun Choi, Ya-Cheng Liao, Young J. Yoon, Jonathan Grimm, Luke D. Lavis, Robert H. Singer, Jennifer Lippincott-Schwartz

https://www.biorxiv.org/content/10.1101/2023.08.01.551382v1

Stem cell-based models of development

Dual PAX3/7 transcriptional activities spatially encode spinal cell fates through distinct gene networks

Robin Rondon, Théaud Hezez, Julien Richard Albert, Bernadette Drayton-Libotte, Gloria Gonzalez-Curto, Frédéric Relaix, Claire Dugast-Darzacq, Pascale Gilardi-Hebenstreit, Vanessa Ribes

https://www.biorxiv.org/content/10.1101/2025.03.11.642668v1

Interplay of EGFR, JNK and ROS signalling in soma-germline communication in the Drosophila testis

Maria Alvarez, Fani Papagiannouli

https://www.biorxiv.org/content/10.1101/2024.06.02.597033v1

WNT-mediating TCF/LEF transcription factor gene expression in early human pluripotency and cell lineages differs from the rodent paradigm

Connor Ross, Takuya Azami, Marika Salonna, Richard Gyuris, Jennifer Nichols, Stefan Hoppler

https://www.biorxiv.org/content/10.1101/2024.10.08.617210v1

STAT3 signalling enhances tissue expansion during postimplantation mouse development

Takuya Azami, Bart Theeuwes, Mai-Linh N Ton, William Mansfield, Luke Harland, Masaki Kinoshita, Berthold Gottgens, Jennifer Nichols

https://www.biorxiv.org/content/10.1101/2024.10.11.617785v1

Other

Orientation tests and long-term movement phenology establish the red admiral Vanessa atalanta as an applicable model for navigation research in migratory butterflies

Alexander Pakhomov, Roberts Jansons, Nazar Shapoval, Fyodor Cellarius, Anatoly Shapoval, Oliver Lindecke

https://www.biorxiv.org/content/10.1101/2023.09.09.554419v1

The evolutionary ancient MEIS transcription factors actuate lineage-specific transcription to establish cardiac fate

Zoulfia Darieva, Peyman Zarrineh, Naomi Phillips, Joshua Mallen, Araceli Garcia Mora, Ian Donaldson, Laure Bridoux, Megan Douglas, Sara F Dias Henriques, Dorothea Schulte, Matthew J Birket, Nicoletta Bobola

https://www.biorxiv.org/content/10.1101/2024.07.18.604075v1

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This list of preprints is focused on work expanding our knowledge on mitochondria in any organism, tissue or cell type, from the normal biology to the pathology.

 



List by Sandra Franco Iborra

Biophysical Society Annual Meeting 2019

Few of the preprints that were discussed in the recent BPS annual meeting at Baltimore, USA

 



List by Joseph Jose Thottacherry

ASCB/EMBO Annual Meeting 2018

This list relates to preprints that were discussed at the recent ASCB conference.

 



List by Dey Lab, Amanda Haage

Also in the developmental biology category:

Biologists @ 100 conference preList

This preList aims to capture all preprints being discussed at the Biologists @100 conference in Liverpool, UK, either as part of the poster sessions or the (flash/short/full-length) talks.

 



List by Jonathan Townson, Jonathan Townson

BSDB/GenSoc Spring Meeting 2024

A list of preprints highlighted at the British Society for Developmental Biology and Genetics Society joint Spring meeting 2024 at Warwick, UK.

 



List by Joyce Yu, Katherine Brown

GfE/ DSDB meeting 2024

This preList highlights the preprints discussed at the 2024 joint German and Dutch developmental biology societies meeting that took place in March 2024 in Osnabrück, Germany.

 



List by Joyce Yu

‘In preprints’ from Development 2022-2023

A list of the preprints featured in Development's 'In preprints' articles between 2022-2023

 



List by Alex Eve, Katherine Brown

preLights peer support – preprints of interest

This is a preprint repository to organise the preprints and preLights covered through the 'preLights peer support' initiative.

 



List by preLights peer support

The Society for Developmental Biology 82nd Annual Meeting

This preList is made up of the preprints discussed during the Society for Developmental Biology 82nd Annual Meeting that took place in Chicago in July 2023.

 



List by Joyce Yu, Katherine Brown

CSHL 87th Symposium: Stem Cells

Preprints mentioned by speakers at the #CSHLsymp23

 



List by Alex Eve

Journal of Cell Science meeting ‘Imaging Cell Dynamics’

This preList highlights the preprints discussed at the JCS meeting 'Imaging Cell Dynamics'. The meeting was held from 14 - 17 May 2023 in Lisbon, Portugal and was organised by Erika Holzbaur, Jennifer Lippincott-Schwartz, Rob Parton and Michael Way.

 



List by Helen Zenner

9th International Symposium on the Biology of Vertebrate Sex Determination

This preList contains preprints discussed during the 9th International Symposium on the Biology of Vertebrate Sex Determination. This conference was held in Kona, Hawaii from April 17th to 21st 2023.

 



List by Martin Estermann

Alumni picks – preLights 5th Birthday

This preList contains preprints that were picked and highlighted by preLights Alumni - an initiative that was set up to mark preLights 5th birthday. More entries will follow throughout February and March 2023.

 



List by Sergio Menchero et al.

CellBio 2022 – An ASCB/EMBO Meeting

This preLists features preprints that were discussed and presented during the CellBio 2022 meeting in Washington, DC in December 2022.

 



List by Nadja Hümpfer et al.

2nd Conference of the Visegrád Group Society for Developmental Biology

Preprints from the 2nd Conference of the Visegrád Group Society for Developmental Biology (2-5 September, 2021, Szeged, Hungary)

 



List by Nándor Lipták

Fibroblasts

The advances in fibroblast biology preList explores the recent discoveries and preprints of the fibroblast world. Get ready to immerse yourself with this list created for fibroblasts aficionados and lovers, and beyond. Here, my goal is to include preprints of fibroblast biology, heterogeneity, fate, extracellular matrix, behavior, topography, single-cell atlases, spatial transcriptomics, and their matrix!

 



List by Osvaldo Contreras

EMBL Synthetic Morphogenesis: From Gene Circuits to Tissue Architecture (2021)

A list of preprints mentioned at the #EESmorphoG virtual meeting in 2021.

 



List by Alex Eve

EMBL Conference: From functional genomics to systems biology

Preprints presented at the virtual EMBL conference "from functional genomics and systems biology", 16-19 November 2020

 



List by Jesus Victorino

Single Cell Biology 2020

A list of preprints mentioned at the Wellcome Genome Campus Single Cell Biology 2020 meeting.

 



List by Alex Eve

Society for Developmental Biology 79th Annual Meeting

Preprints at SDB 2020

 



List by Irepan Salvador-Martinez, Martin Estermann

FENS 2020

A collection of preprints presented during the virtual meeting of the Federation of European Neuroscience Societies (FENS) in 2020

 



List by Ana Dorrego-Rivas

Planar Cell Polarity – PCP

This preList contains preprints about the latest findings on Planar Cell Polarity (PCP) in various model organisms at the molecular, cellular and tissue levels.

 



List by Ana Dorrego-Rivas

Cell Polarity

Recent research from the field of cell polarity is summarized in this list of preprints. It comprises of studies focusing on various forms of cell polarity ranging from epithelial polarity, planar cell polarity to front-to-rear polarity.

 



List by Yamini Ravichandran

TAGC 2020

Preprints recently presented at the virtual Allied Genetics Conference, April 22-26, 2020. #TAGC20

 



List by Maiko Kitaoka et al.

3D Gastruloids

A curated list of preprints related to Gastruloids (in vitro models of early development obtained by 3D aggregation of embryonic cells). Updated until July 2021.

 



List by Paul Gerald L. Sanchez and Stefano Vianello

ASCB EMBO Annual Meeting 2019

A collection of preprints presented at the 2019 ASCB EMBO Meeting in Washington, DC (December 7-11)

 



List by Madhuja Samaddar et al.

EDBC Alicante 2019

Preprints presented at the European Developmental Biology Congress (EDBC) in Alicante, October 23-26 2019.

 



List by Sergio Menchero et al.

EMBL Seeing is Believing – Imaging the Molecular Processes of Life

Preprints discussed at the 2019 edition of Seeing is Believing, at EMBL Heidelberg from the 9th-12th October 2019

 



List by Dey Lab

SDB 78th Annual Meeting 2019

A curation of the preprints presented at the SDB meeting in Boston, July 26-30 2019. The preList will be updated throughout the duration of the meeting.

 



List by Alex Eve

Lung Disease and Regeneration

This preprint list compiles highlights from the field of lung biology.

 



List by Rob Hynds

Young Embryologist Network Conference 2019

Preprints presented at the Young Embryologist Network 2019 conference, 13 May, The Francis Crick Institute, London

 



List by Alex Eve

Pattern formation during development

The aim of this preList is to integrate results about the mechanisms that govern patterning during development, from genes implicated in the processes to theoritical models of pattern formation in nature.

 



List by Alexa Sadier

BSCB/BSDB Annual Meeting 2019

Preprints presented at the BSCB/BSDB Annual Meeting 2019

 



List by Dey Lab

Zebrafish immunology

A compilation of cutting-edge research that uses the zebrafish as a model system to elucidate novel immunological mechanisms in health and disease.

 



List by Shikha Nayar

Also in the evolutionary biology category:

Biologists @ 100 conference preList

This preList aims to capture all preprints being discussed at the Biologists @100 conference in Liverpool, UK, either as part of the poster sessions or the (flash/short/full-length) talks.

 



List by Jonathan Townson, Jonathan Townson

‘In preprints’ from Development 2022-2023

A list of the preprints featured in Development's 'In preprints' articles between 2022-2023

 



List by Alex Eve, Katherine Brown

preLights peer support – preprints of interest

This is a preprint repository to organise the preprints and preLights covered through the 'preLights peer support' initiative.

 



List by preLights peer support

EMBO | EMBL Symposium: The organism and its environment

This preList contains preprints discussed during the 'EMBO | EMBL Symposium: The organism and its environment', organised at EMBL Heidelberg, Germany (May 2023).

 



List by Girish Kale

9th International Symposium on the Biology of Vertebrate Sex Determination

This preList contains preprints discussed during the 9th International Symposium on the Biology of Vertebrate Sex Determination. This conference was held in Kona, Hawaii from April 17th to 21st 2023.

 



List by Martin Estermann

EMBL Synthetic Morphogenesis: From Gene Circuits to Tissue Architecture (2021)

A list of preprints mentioned at the #EESmorphoG virtual meeting in 2021.

 



List by Alex Eve

Planar Cell Polarity – PCP

This preList contains preprints about the latest findings on Planar Cell Polarity (PCP) in various model organisms at the molecular, cellular and tissue levels.

 



List by Ana Dorrego-Rivas

TAGC 2020

Preprints recently presented at the virtual Allied Genetics Conference, April 22-26, 2020. #TAGC20

 



List by Maiko Kitaoka et al.

ECFG15 – Fungal biology

Preprints presented at 15th European Conference on Fungal Genetics 17-20 February 2020 Rome

 



List by Hiral Shah

COVID-19 / SARS-CoV-2 preprints

List of important preprints dealing with the ongoing coronavirus outbreak. See http://covidpreprints.com for additional resources and timeline, and https://connect.biorxiv.org/relate/content/181 for full list of bioRxiv and medRxiv preprints on this topic

 



List by Dey Lab, Zhang-He Goh

1

SDB 78th Annual Meeting 2019

A curation of the preprints presented at the SDB meeting in Boston, July 26-30 2019. The preList will be updated throughout the duration of the meeting.

 



List by Alex Eve

Pattern formation during development

The aim of this preList is to integrate results about the mechanisms that govern patterning during development, from genes implicated in the processes to theoritical models of pattern formation in nature.

 



List by Alexa Sadier

Also in the genetics category:

Biologists @ 100 conference preList

This preList aims to capture all preprints being discussed at the Biologists @100 conference in Liverpool, UK, either as part of the poster sessions or the (flash/short/full-length) talks.

 



List by Jonathan Townson, Jonathan Townson

Early 2025 preprints – the genetics & genomics edition

In this community-driven preList, a group of preLighters, with expertise in different areas of genetics and genomics have worked together to create this preprint reading list. Categories include: 1) bioinformatics 2) epigenetics 3) gene regulation 4) genomics 5) transcriptomics

 



List by Chee Kiang Ewe et al.

January in preprints – the CellBio edition

A group of preLighters, with expertise in different areas of cell biology, have worked together to create this preprint reading lists for researchers with an interest in cell biology. This month, categories include: 1) biochemistry/metabolism 2) cell migration 3) cell organelles and organisation 4) cell signalling and mechanosensing 5) genetics/gene expression

 



List by Barbora Knotkova et al.

End-of-year preprints – the genetics & genomics edition

In this community-driven preList, a group of preLighters, with expertise in different areas of genetics and genomics have worked together to create this preprint reading list. Categories include: 1) genomics 2) bioinformatics 3) gene regulation 4) epigenetics

 



List by Chee Kiang Ewe et al.

BSDB/GenSoc Spring Meeting 2024

A list of preprints highlighted at the British Society for Developmental Biology and Genetics Society joint Spring meeting 2024 at Warwick, UK.

 



List by Joyce Yu, Katherine Brown

BSCB-Biochemical Society 2024 Cell Migration meeting

This preList features preprints that were discussed and presented during the BSCB-Biochemical Society 2024 Cell Migration meeting in Birmingham, UK in April 2024. Kindly put together by Sara Morais da Silva, Reviews Editor at Journal of Cell Science.

 



List by Reinier Prosee

9th International Symposium on the Biology of Vertebrate Sex Determination

This preList contains preprints discussed during the 9th International Symposium on the Biology of Vertebrate Sex Determination. This conference was held in Kona, Hawaii from April 17th to 21st 2023.

 



List by Martin Estermann

Alumni picks – preLights 5th Birthday

This preList contains preprints that were picked and highlighted by preLights Alumni - an initiative that was set up to mark preLights 5th birthday. More entries will follow throughout February and March 2023.

 



List by Sergio Menchero et al.

Semmelweis Symposium 2022: 40th anniversary of international medical education at Semmelweis University

This preList contains preprints discussed during the 'Semmelweis Symposium 2022' (7-9 November), organised around the 40th anniversary of international medical education at Semmelweis University covering a wide range of topics.

 



List by Nándor Lipták

20th “Genetics Workshops in Hungary”, Szeged (25th, September)

In this annual conference, Hungarian geneticists, biochemists and biotechnologists presented their works. Link: http://group.szbk.u-szeged.hu/minikonf/archive/prg2021.pdf

 



List by Nándor Lipták

2nd Conference of the Visegrád Group Society for Developmental Biology

Preprints from the 2nd Conference of the Visegrád Group Society for Developmental Biology (2-5 September, 2021, Szeged, Hungary)

 



List by Nándor Lipták

EMBL Conference: From functional genomics to systems biology

Preprints presented at the virtual EMBL conference "from functional genomics and systems biology", 16-19 November 2020

 



List by Jesus Victorino

TAGC 2020

Preprints recently presented at the virtual Allied Genetics Conference, April 22-26, 2020. #TAGC20

 



List by Maiko Kitaoka et al.

ECFG15 – Fungal biology

Preprints presented at 15th European Conference on Fungal Genetics 17-20 February 2020 Rome

 



List by Hiral Shah

Autophagy

Preprints on autophagy and lysosomal degradation and its role in neurodegeneration and disease. Includes molecular mechanisms, upstream signalling and regulation as well as studies on pharmaceutical interventions to upregulate the process.

 



List by Sandra Malmgren Hill

Zebrafish immunology

A compilation of cutting-edge research that uses the zebrafish as a model system to elucidate novel immunological mechanisms in health and disease.

 



List by Shikha Nayar

Also in the genomics category:

Biologists @ 100 conference preList

This preList aims to capture all preprints being discussed at the Biologists @100 conference in Liverpool, UK, either as part of the poster sessions or the (flash/short/full-length) talks.

 



List by Jonathan Townson, Jonathan Townson

Early 2025 preprints – the genetics & genomics edition

In this community-driven preList, a group of preLighters, with expertise in different areas of genetics and genomics have worked together to create this preprint reading list. Categories include: 1) bioinformatics 2) epigenetics 3) gene regulation 4) genomics 5) transcriptomics

 



List by Chee Kiang Ewe et al.

End-of-year preprints – the genetics & genomics edition

In this community-driven preList, a group of preLighters, with expertise in different areas of genetics and genomics have worked together to create this preprint reading list. Categories include: 1) genomics 2) bioinformatics 3) gene regulation 4) epigenetics

 



List by Chee Kiang Ewe et al.

BSCB-Biochemical Society 2024 Cell Migration meeting

This preList features preprints that were discussed and presented during the BSCB-Biochemical Society 2024 Cell Migration meeting in Birmingham, UK in April 2024. Kindly put together by Sara Morais da Silva, Reviews Editor at Journal of Cell Science.

 



List by Reinier Prosee

9th International Symposium on the Biology of Vertebrate Sex Determination

This preList contains preprints discussed during the 9th International Symposium on the Biology of Vertebrate Sex Determination. This conference was held in Kona, Hawaii from April 17th to 21st 2023.

 



List by Martin Estermann

Semmelweis Symposium 2022: 40th anniversary of international medical education at Semmelweis University

This preList contains preprints discussed during the 'Semmelweis Symposium 2022' (7-9 November), organised around the 40th anniversary of international medical education at Semmelweis University covering a wide range of topics.

 



List by Nándor Lipták

20th “Genetics Workshops in Hungary”, Szeged (25th, September)

In this annual conference, Hungarian geneticists, biochemists and biotechnologists presented their works. Link: http://group.szbk.u-szeged.hu/minikonf/archive/prg2021.pdf

 



List by Nándor Lipták

EMBL Conference: From functional genomics to systems biology

Preprints presented at the virtual EMBL conference "from functional genomics and systems biology", 16-19 November 2020

 



List by Jesus Victorino

TAGC 2020

Preprints recently presented at the virtual Allied Genetics Conference, April 22-26, 2020. #TAGC20

 



List by Maiko Kitaoka et al.

Also in the molecular biology category:

Biologists @ 100 conference preList

This preList aims to capture all preprints being discussed at the Biologists @100 conference in Liverpool, UK, either as part of the poster sessions or the (flash/short/full-length) talks.

 



List by Jonathan Townson, Jonathan Townson

February in preprints – the CellBio edition

A group of preLighters, with expertise in different areas of cell biology, have worked together to create this preprint reading lists for researchers with an interest in cell biology. This month, categories include: 1) biochemistry and cell metabolism 2) cell organelles and organisation 3) cell signalling, migration and mechanosensing

 



List by Barbora Knotkova et al.

Community-driven preList – Immunology

In this community-driven preList, a group of preLighters, with expertise in different areas of immunology have worked together to create this preprint reading list.

 



List by Felipe Del Valle Batalla et al.

January in preprints – the CellBio edition

A group of preLighters, with expertise in different areas of cell biology, have worked together to create this preprint reading lists for researchers with an interest in cell biology. This month, categories include: 1) biochemistry/metabolism 2) cell migration 3) cell organelles and organisation 4) cell signalling and mechanosensing 5) genetics/gene expression

 



List by Barbora Knotkova et al.

2024 Hypothalamus GRC

This 2024 Hypothalamus GRC (Gordon Research Conference) preList offers an overview of cutting-edge research focused on the hypothalamus, a critical brain region involved in regulating homeostasis, behavior, and neuroendocrine functions. The studies included cover a range of topics, including neural circuits, molecular mechanisms, and the role of the hypothalamus in health and disease. This collection highlights some of the latest advances in understanding hypothalamic function, with potential implications for treating disorders such as obesity, stress, and metabolic diseases.

 



List by Nathalie Krauth

BSCB-Biochemical Society 2024 Cell Migration meeting

This preList features preprints that were discussed and presented during the BSCB-Biochemical Society 2024 Cell Migration meeting in Birmingham, UK in April 2024. Kindly put together by Sara Morais da Silva, Reviews Editor at Journal of Cell Science.

 



List by Reinier Prosee

‘In preprints’ from Development 2022-2023

A list of the preprints featured in Development's 'In preprints' articles between 2022-2023

 



List by Alex Eve, Katherine Brown

CSHL 87th Symposium: Stem Cells

Preprints mentioned by speakers at the #CSHLsymp23

 



List by Alex Eve

9th International Symposium on the Biology of Vertebrate Sex Determination

This preList contains preprints discussed during the 9th International Symposium on the Biology of Vertebrate Sex Determination. This conference was held in Kona, Hawaii from April 17th to 21st 2023.

 



List by Martin Estermann

Alumni picks – preLights 5th Birthday

This preList contains preprints that were picked and highlighted by preLights Alumni - an initiative that was set up to mark preLights 5th birthday. More entries will follow throughout February and March 2023.

 



List by Sergio Menchero et al.

CellBio 2022 – An ASCB/EMBO Meeting

This preLists features preprints that were discussed and presented during the CellBio 2022 meeting in Washington, DC in December 2022.

 



List by Nadja Hümpfer et al.

EMBL Synthetic Morphogenesis: From Gene Circuits to Tissue Architecture (2021)

A list of preprints mentioned at the #EESmorphoG virtual meeting in 2021.

 



List by Alex Eve

FENS 2020

A collection of preprints presented during the virtual meeting of the Federation of European Neuroscience Societies (FENS) in 2020

 



List by Ana Dorrego-Rivas

ECFG15 – Fungal biology

Preprints presented at 15th European Conference on Fungal Genetics 17-20 February 2020 Rome

 



List by Hiral Shah

ASCB EMBO Annual Meeting 2019

A collection of preprints presented at the 2019 ASCB EMBO Meeting in Washington, DC (December 7-11)

 



List by Madhuja Samaddar et al.

Lung Disease and Regeneration

This preprint list compiles highlights from the field of lung biology.

 



List by Rob Hynds

MitoList

This list of preprints is focused on work expanding our knowledge on mitochondria in any organism, tissue or cell type, from the normal biology to the pathology.

 



List by Sandra Franco Iborra

Also in the neuroscience category:

Biologists @ 100 conference preList

This preList aims to capture all preprints being discussed at the Biologists @100 conference in Liverpool, UK, either as part of the poster sessions or the (flash/short/full-length) talks.

 



List by Jonathan Townson, Jonathan Townson

2024 Hypothalamus GRC

This 2024 Hypothalamus GRC (Gordon Research Conference) preList offers an overview of cutting-edge research focused on the hypothalamus, a critical brain region involved in regulating homeostasis, behavior, and neuroendocrine functions. The studies included cover a range of topics, including neural circuits, molecular mechanisms, and the role of the hypothalamus in health and disease. This collection highlights some of the latest advances in understanding hypothalamic function, with potential implications for treating disorders such as obesity, stress, and metabolic diseases.

 



List by Nathalie Krauth

‘In preprints’ from Development 2022-2023

A list of the preprints featured in Development's 'In preprints' articles between 2022-2023

 



List by Alex Eve, Katherine Brown

CSHL 87th Symposium: Stem Cells

Preprints mentioned by speakers at the #CSHLsymp23

 



List by Alex Eve

Journal of Cell Science meeting ‘Imaging Cell Dynamics’

This preList highlights the preprints discussed at the JCS meeting 'Imaging Cell Dynamics'. The meeting was held from 14 - 17 May 2023 in Lisbon, Portugal and was organised by Erika Holzbaur, Jennifer Lippincott-Schwartz, Rob Parton and Michael Way.

 



List by Helen Zenner

FENS 2020

A collection of preprints presented during the virtual meeting of the Federation of European Neuroscience Societies (FENS) in 2020

 



List by Ana Dorrego-Rivas

ASCB EMBO Annual Meeting 2019

A collection of preprints presented at the 2019 ASCB EMBO Meeting in Washington, DC (December 7-11)

 



List by Madhuja Samaddar et al.

SDB 78th Annual Meeting 2019

A curation of the preprints presented at the SDB meeting in Boston, July 26-30 2019. The preList will be updated throughout the duration of the meeting.

 



List by Alex Eve

Autophagy

Preprints on autophagy and lysosomal degradation and its role in neurodegeneration and disease. Includes molecular mechanisms, upstream signalling and regulation as well as studies on pharmaceutical interventions to upregulate the process.

 



List by Sandra Malmgren Hill

Young Embryologist Network Conference 2019

Preprints presented at the Young Embryologist Network 2019 conference, 13 May, The Francis Crick Institute, London

 



List by Alex Eve

Also in the physiology category:

Biologists @ 100 conference preList

This preList aims to capture all preprints being discussed at the Biologists @100 conference in Liverpool, UK, either as part of the poster sessions or the (flash/short/full-length) talks.

 



List by Jonathan Townson, Jonathan Townson

Fibroblasts

The advances in fibroblast biology preList explores the recent discoveries and preprints of the fibroblast world. Get ready to immerse yourself with this list created for fibroblasts aficionados and lovers, and beyond. Here, my goal is to include preprints of fibroblast biology, heterogeneity, fate, extracellular matrix, behavior, topography, single-cell atlases, spatial transcriptomics, and their matrix!

 



List by Osvaldo Contreras

FENS 2020

A collection of preprints presented during the virtual meeting of the Federation of European Neuroscience Societies (FENS) in 2020

 



List by Ana Dorrego-Rivas

TAGC 2020

Preprints recently presented at the virtual Allied Genetics Conference, April 22-26, 2020. #TAGC20

 



List by Maiko Kitaoka et al.

Autophagy

Preprints on autophagy and lysosomal degradation and its role in neurodegeneration and disease. Includes molecular mechanisms, upstream signalling and regulation as well as studies on pharmaceutical interventions to upregulate the process.

 



List by Sandra Malmgren Hill

Cellular metabolism

A curated list of preprints related to cellular metabolism at Biorxiv by Pablo Ranea Robles from the Prelights community. Special interest on lipid metabolism, peroxisomes and mitochondria.

 



List by Pablo Ranea Robles

Also in the animal behavior and cognition category:

Evolution of taste processing shifts dietary preference

Enrico Bertolini, Daniel Münch, Justine Pascual, et al.

Selected by 31 March 2025

T. W. Schwanitz

Evolutionary Biology

A zebrafish circuit for behavioral credit assignment

Emanuele Paoli, Virginia Palieri, Amey Shenoy, et al.

Selected by 03 March 2025

Muhammed Sinan Malik

Neuroscience

Visually-guided compensation of deafening-induced song deterioration

M Rolland, A Zai, RHR Hahnloser, et al.

Selected by 04 February 2025

Maitri Manjunath

Animal Behavior and Cognition

Also in the biochemistry category:

Discovery of a Potent and Selective Inhibitor of Human NLRP3 with a Novel Binding Modality and Mechanism of Action

Kevin Wilhelmsen, Aditi Deshpande, Sarah Tronnes, et al.

Selected by 13 February 2025

Roberto Amadio

Biochemistry

Enzymatic access to the rare ΔUA (1→4) Glc 3, 6, N-sulfated heparin disaccharide, implications for heparin quality control

T. K. Kandola, C. J. Mycroft-West, M. L. Andrade De Lima, et al.

Selected by 03 January 2025

Adriani Felix et al.

Biochemistry

Factor XI localization in human deep venous thrombus and function of activated factor XI on venous thrombus formation and hemostasis in rabbit

Nobuyuki Oguri, Toshihiro Gi, Eriko Nakamura, et al.

Selected by 03 January 2025

Adriani Felix et al.

Biochemistry

Also in the biophysics category:

Hyaluronic Acid and Emergent Tissue Mechanics Orchestrate Digit Tip Regeneration

Byron W.H. Mui, Joseph Y. Wong, Toni Bray, et al.

Selected by 20 March 2025

Jonathan Townson

Developmental Biology

Target cell tension regulates macrophage trogocytosis

Caitlin E. Cornell, Aymeric Chorlay, Deepak Krishnamurthy, et al.

Selected by 04 January 2025

Felipe Del Valle Batalla

Biophysics

Restoring mechanophenotype reverts malignant properties of ECM-enriched vocal fold cancer

Jasmin Kaivola, Karolina Punovuori, Megan R. Chastney, et al.

Selected by 19 December 2024

Teodora Piskova

Cancer Biology

Also in the cancer biology category:

Target cell tension regulates macrophage trogocytosis

Caitlin E. Cornell, Aymeric Chorlay, Deepak Krishnamurthy, et al.

Selected by 04 January 2025

Felipe Del Valle Batalla

Biophysics

Integrin conformation-dependent neutrophil slowing obstructs the capillaries of the pre-metastatic lung in a model of breast cancer

Frédéric Fercoq, Gemma S. Cairns, Marco De Donatis, et al.

Selected by 07 October 2024

Simon Cleary

Cancer Biology

Mitochondria-derived nuclear ATP surge protects against confinement-induced proliferation defects

Ritobrata Ghose, Fabio Pezzano, Savvas Kourtis, et al.

Selected by 16 May 2024

Teodora Piskova

Cell Biology

Also in the cell biology category:

Deletion of PIEZO1 in adult cardiomyocytes accelerates cardiac aging and causes premature death

Ze-Yan Yu, Yang Guo, Scott Kesteven, et al.

Selected by 17 March 2025

Theodora Stougiannou

Cell Biology

Megakaryocytes assemble a three-dimensional cage of extracellular matrix that controls their maturation and anchoring to the vascular niche

Claire Masson, Cyril Scandola, Jean-Yves Rinckel, et al.

Selected by 21 February 2025

Simon Cleary

Physiology

Fis1 is required for the development of the dendritic mitochondrial network in pyramidal cortical neurons

Klaudia Strucinska, Parker Kneis, Travis Pennington, et al.

Selected by 11 February 2025

Felipe Del Valle Batalla

Cell Biology

Also in the developmental biology category:

Ectopic head regeneration after nervous system ablation in a sea anemone

Fatemeh Mazloumi Gavgani, Johanna E.M. Kraus, Joshua November, et al.

Selected by 24 March 2025

Isabella Cisneros

Developmental Biology

Hyaluronic Acid and Emergent Tissue Mechanics Orchestrate Digit Tip Regeneration

Byron W.H. Mui, Joseph Y. Wong, Toni Bray, et al.

Selected by 20 March 2025

Jonathan Townson

Developmental Biology

Visually-guided compensation of deafening-induced song deterioration

M Rolland, A Zai, RHR Hahnloser, et al.

Selected by 04 February 2025

Maitri Manjunath

Animal Behavior and Cognition

Also in the ecology category:

Green synthesized silver nanoparticles from Moringa: Potential for preventative treatment of SARS-CoV-2 contaminated water

Adebayo J. Bello, Omorilewa B. Ebunoluwa, Rukayat O. Ayorinde, et al.

Selected by 14 November 2024

Safieh Shah, Benjamin Dominik Maier

Epidemiology

Precision Farming in Aquaculture: Use of a non-invasive, AI-powered real-time automated behavioural monitoring approach to predict gill health and improve welfare in Atlantic salmon (Salmo salar) aquaculture farms

Meredith Burke, Dragana Nikolic, Pieter Fabry, et al.

Selected by 11 September 2024

Jasmine Talevi

Animal Behavior and Cognition

Gestational exposure to high heat-humidity conditions impairs mouse embryonic development

Avinchal Manhas, Amritesh Sarkar, Srimonta Gayen

Selected by 08 July 2024

Girish Kale, preLights peer support

Developmental Biology

Also in the evolutionary biology category:

Evolution of taste processing shifts dietary preference

Enrico Bertolini, Daniel Münch, Justine Pascual, et al.

Selected by 31 March 2025

T. W. Schwanitz

Evolutionary Biology

Loss of a morph is associated with asymmetric character release in a radiation of woodland salamanders

Brian P. Waldron, Maggie M. Hantak, Emily F. Watts, et al.

Selected by 18 March 2025

Stefan Friedrich Wirth

Evolutionary Biology

Ancestral sequence reconstruction of the Mic60 Mitofilin domain reveals residues supporting respiration in yeast

Friederike M. C. Benning, Tristan A. Bell, Tran H. Nguyen, et al.

Selected by 07 March 2025

Barbora Knotkova

Evolutionary Biology

Also in the genetics category:

Ectopic head regeneration after nervous system ablation in a sea anemone

Fatemeh Mazloumi Gavgani, Johanna E.M. Kraus, Joshua November, et al.

Selected by 24 March 2025

Isabella Cisneros

Developmental Biology

Conservation and divergence of regulatory architecture in nitrate-responsive plant gene circuits

C Bian, GS Demirer, MT Oz, et al.

Selected by 14 March 2025

Jeny Jose

Plant Biology

Intracellular diffusion in the cytoplasm increases with cell size in fission yeast

Catherine Tan, Michael C. Lanz, Matthew Swaffer, et al.

Selected by 18 October 2024

Leeba Ann Chacko, Sameer Thukral

Cell Biology

Also in the genomics category:

Evolution of taste processing shifts dietary preference

Enrico Bertolini, Daniel Münch, Justine Pascual, et al.

Selected by 31 March 2025

T. W. Schwanitz

Evolutionary Biology

Loss of a morph is associated with asymmetric character release in a radiation of woodland salamanders

Brian P. Waldron, Maggie M. Hantak, Emily F. Watts, et al.

Selected by 18 March 2025

Stefan Friedrich Wirth

Evolutionary Biology

Decoding the Molecular Language of Proteins with Evolla

Xibin Zhou, Chenchen Han, Yingqi Zhang, et al.

Selected by 14 March 2025

Jawdat Sandakly

Bioinformatics

Also in the molecular biology category:

Conservation and divergence of regulatory architecture in nitrate-responsive plant gene circuits

C Bian, GS Demirer, MT Oz, et al.

Selected by 14 March 2025

Jeny Jose

Plant Biology

Levetiracetam prevents Aβ42 production through SV2a-dependent modulation of App processing in Alzheimer’s disease models

Nalini R. Rao, Olivia DeGulis, Toshihiro Nomura, et al.

Selected by 11 January 2025

Jawdat Sandakly

Neuroscience

Chromosomal instability in human trophoblast stem cells and placentas

Danyang Wang, Andrew Cearlock, Katherine Lane, et al.

Selected by 31 December 2024

Carly Guiltinan

Cell Biology

Also in the neuroscience category:

Evolution of taste processing shifts dietary preference

Enrico Bertolini, Daniel Münch, Justine Pascual, et al.

Selected by 31 March 2025

T. W. Schwanitz

Evolutionary Biology

A zebrafish circuit for behavioral credit assignment

Emanuele Paoli, Virginia Palieri, Amey Shenoy, et al.

Selected by 03 March 2025

Muhammed Sinan Malik

Neuroscience

Fis1 is required for the development of the dendritic mitochondrial network in pyramidal cortical neurons

Klaudia Strucinska, Parker Kneis, Travis Pennington, et al.

Selected by 11 February 2025

Felipe Del Valle Batalla

Cell Biology

Also in the physiology category:

Hyaluronic Acid and Emergent Tissue Mechanics Orchestrate Digit Tip Regeneration

Byron W.H. Mui, Joseph Y. Wong, Toni Bray, et al.

Selected by 20 March 2025

Jonathan Townson

Developmental Biology

Scaly-Tail Organ Enhances Static Stability during Pel’s Scaly-tailed Flying Squirrels’ Arboreal Locomotion

Andrew K. Schulz, Mrudul Chellapurath, Pranav C. Khandelwal, et al.

Selected by 28 February 2025

EMB EMB_Liv et al.

Evolutionary Biology

Megakaryocytes assemble a three-dimensional cage of extracellular matrix that controls their maturation and anchoring to the vascular niche

Claire Masson, Cyril Scandola, Jean-Yves Rinckel, et al.

Selected by 21 February 2025

Simon Cleary

Physiology

Also in the zoology category:

Loss of a morph is associated with asymmetric character release in a radiation of woodland salamanders

Brian P. Waldron, Maggie M. Hantak, Emily F. Watts, et al.

Selected by 18 March 2025

Stefan Friedrich Wirth

Evolutionary Biology

Scaly-Tail Organ Enhances Static Stability during Pel’s Scaly-tailed Flying Squirrels’ Arboreal Locomotion

Andrew K. Schulz, Mrudul Chellapurath, Pranav C. Khandelwal, et al.

Selected by 28 February 2025

EMB EMB_Liv et al.

Evolutionary Biology

Visually-guided compensation of deafening-induced song deterioration

M Rolland, A Zai, RHR Hahnloser, et al.

Selected by 04 February 2025

Maitri Manjunath

Animal Behavior and Cognition